Protein–RNA interactions for Protein: Q64705

Usf2, Upstream stimulatory factor 2, mousemouse

Known RBP Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf2Q64705 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Usf2Q64705 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC15.24■□□□□ 0.03
Usf2Q64705 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Usf2Q64705 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Usf2Q64705 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usf2Q64705 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC15.23■□□□□ 0.03
Usf2Q64705 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.23■□□□□ 0.03
Usf2Q64705 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Usf2Q64705 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usf2Q64705 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usf2Q64705 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usf2Q64705 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usf2Q64705 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Usf2Q64705 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.23■□□□□ 0.03
Usf2Q64705 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usf2Q64705 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Usf2Q64705 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Usf2Q64705 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Usf2Q64705 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Usf2Q64705 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC15.22■□□□□ 0.03
Usf2Q64705 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Usf2Q64705 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
Usf2Q64705 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.22■□□□□ 0.03
Usf2Q64705 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Usf2Q64705 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Usf2Q64705 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Usf2Q64705 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.22■□□□□ 0.03
Usf2Q64705 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Usf2Q64705 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usf2Q64705 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Usf2Q64705 Gm18688-201ENSMUST00000204695 1859 ntBASIC15.21■□□□□ 0.03
Usf2Q64705 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usf2Q64705 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC15.21■□□□□ 0.03
Usf2Q64705 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.21■□□□□ 0.03
Usf2Q64705 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usf2Q64705 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Usf2Q64705 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usf2Q64705 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usf2Q64705 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usf2Q64705 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Usf2Q64705 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Usf2Q64705 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC15.2■□□□□ 0.02
Usf2Q64705 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC15.2■□□□□ 0.02
Usf2Q64705 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Usf2Q64705 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Usf2Q64705 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Usf2Q64705 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Usf2Q64705 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Usf2Q64705 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Usf2Q64705 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usf2Q64705 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Usf2Q64705 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms