Protein–RNA interactions for Protein: Q3TTP0

Shcbp1l, Testicular spindle-associated protein SHCBP1L, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shcbp1lQ3TTP0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC18.06■□□□□ 0.48
Shcbp1lQ3TTP0 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shcbp1lQ3TTP0 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shcbp1lQ3TTP0 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Shcbp1lQ3TTP0 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC18.06■□□□□ 0.48
Shcbp1lQ3TTP0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shcbp1lQ3TTP0 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shcbp1lQ3TTP0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Shcbp1lQ3TTP0 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 AC153881.1-201ENSMUST00000214448 284 ntBASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Shcbp1lQ3TTP0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Shcbp1lQ3TTP0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Mtag2-201ENSMUST00000058665 714 ntBASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.03■□□□□ 0.48
Shcbp1lQ3TTP0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Shcbp1lQ3TTP0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shcbp1lQ3TTP0 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shcbp1lQ3TTP0 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
Shcbp1lQ3TTP0 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Shcbp1lQ3TTP0 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 BC021767-201ENSMUST00000126387 1716 ntBASIC18.01■□□□□ 0.47
Shcbp1lQ3TTP0 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18■□□□□ 0.47
Shcbp1lQ3TTP0 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC18■□□□□ 0.47
Shcbp1lQ3TTP0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms