Protein–RNA interactions for Protein: Q2EG98

Pkd1l3, Polycystic kidney disease protein 1-like 3, mousemouse

Predictions only

Length 2,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd1l3Q2EG98 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Pkd1l3Q2EG98 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Timm23-208ENSMUST00000226683 750 ntBASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Pkd1l3Q2EG98 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pkd1l3Q2EG98 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pkd1l3Q2EG98 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pkd1l3Q2EG98 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.08■□□□□ 0.17
Pkd1l3Q2EG98 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Pkd1l3Q2EG98 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.17
Pkd1l3Q2EG98 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Pkd1l3Q2EG98 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Pkd1l3Q2EG98 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pkd1l3Q2EG98 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.08■□□□□ 0.16
Pkd1l3Q2EG98 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pkd1l3Q2EG98 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Pkd1l3Q2EG98 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Gm8668-201ENSMUST00000120559 1447 ntBASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Pkd1l3Q2EG98 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 AC121577.1-201ENSMUST00000227302 707 ntBASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Pkd1l3Q2EG98 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Gm11643-201ENSMUST00000119578 864 ntBASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Pkd1l3Q2EG98 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 AC130671.1-201ENSMUST00000227384 1237 ntBASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Gm38308-201ENSMUST00000194934 1809 ntBASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Pkd1l3Q2EG98 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms