Protein–RNA interactions for Protein: P61620

Sec61a1, Protein transport protein Sec61 subunit alpha isoform 1, mousemouse

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a1P61620 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC15.79■□□□□ 0.12
Sec61a1P61620 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Sec61a1P61620 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Sec61a1P61620 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.78■□□□□ 0.12
Sec61a1P61620 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Sec61a1P61620 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Sec61a1P61620 Gm43213-201ENSMUST00000151866 1790 ntBASIC15.78■□□□□ 0.12
Sec61a1P61620 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC15.78■□□□□ 0.12
Sec61a1P61620 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Gm5828-201ENSMUST00000071842 1860 ntBASIC15.78■□□□□ 0.12
Sec61a1P61620 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Sec61a1P61620 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a1P61620 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a1P61620 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a1P61620 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC15.77■□□□□ 0.12
Sec61a1P61620 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a1P61620 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a1P61620 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a1P61620 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Sec61a1P61620 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Sec61a1P61620 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a1P61620 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Sec61a1P61620 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC15.77■□□□□ 0.12
Sec61a1P61620 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC15.77■□□□□ 0.12
Sec61a1P61620 Gm5297-201ENSMUST00000198555 1171 ntBASIC15.77■□□□□ 0.12
Sec61a1P61620 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.77■□□□□ 0.12
Sec61a1P61620 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC15.77■□□□□ 0.12
Sec61a1P61620 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC15.77■□□□□ 0.12
Sec61a1P61620 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a1P61620 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a1P61620 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Sec61a1P61620 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
Sec61a1P61620 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC15.76■□□□□ 0.11
Sec61a1P61620 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sec61a1P61620 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC15.76■□□□□ 0.11
Sec61a1P61620 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sec61a1P61620 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Sec61a1P61620 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Sec61a1P61620 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Sec61a1P61620 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sec61a1P61620 Gm13146-201ENSMUST00000118508 780 ntBASIC15.75■□□□□ 0.11
Sec61a1P61620 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Sec61a1P61620 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Sec61a1P61620 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Sec61a1P61620 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Sec61a1P61620 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Sec61a1P61620 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC15.74■□□□□ 0.11
Sec61a1P61620 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC15.74■□□□□ 0.11
Sec61a1P61620 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Sec61a1P61620 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.74■□□□□ 0.11
Sec61a1P61620 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Sec61a1P61620 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms