Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Ptprs-211ENSMUST00000223859 5588 ntBASIC12.79□□□□□ -0.36
Cks1bP61025 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Cks1bP61025 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC12.78□□□□□ -0.36
Cks1bP61025 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.78□□□□□ -0.36
Cks1bP61025 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Clvs2-201ENSMUST00000019920 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Cks1bP61025 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC12.78□□□□□ -0.36
Cks1bP61025 Krt8-ps-201ENSMUST00000208495 945 ntBASIC12.78□□□□□ -0.36
Cks1bP61025 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Dancr-204ENSMUST00000132389 2347 ntBASIC12.78□□□□□ -0.36
Cks1bP61025 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cks1bP61025 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Cks1bP61025 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cks1bP61025 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Cks1bP61025 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cks1bP61025 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC12.77□□□□□ -0.37
Cks1bP61025 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC12.77□□□□□ -0.37
Cks1bP61025 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cks1bP61025 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC12.77□□□□□ -0.37
Cks1bP61025 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cks1bP61025 Gm28265-201ENSMUST00000188201 2319 ntBASIC12.77□□□□□ -0.37
Cks1bP61025 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
Cks1bP61025 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Cks1bP61025 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cks1bP61025 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Gm15546-201ENSMUST00000122095 826 ntBASIC12.76□□□□□ -0.37
Cks1bP61025 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC12.76□□□□□ -0.37
Cks1bP61025 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.76□□□□□ -0.37
Cks1bP61025 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.76□□□□□ -0.37
Cks1bP61025 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cks1bP61025 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Cks1bP61025 BC021767-201ENSMUST00000126387 1716 ntBASIC12.76□□□□□ -0.37
Cks1bP61025 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cks1bP61025 Gm18688-201ENSMUST00000204695 1859 ntBASIC12.76□□□□□ -0.37
Cks1bP61025 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Cks1bP61025 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cks1bP61025 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms