Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Gm19094-201ENSMUST00000209791 1246 ntBASIC20.04■□□□□ 0.8
Tpm1P58771 Gm13241-201ENSMUST00000094493 780 ntBASIC20.04■□□□□ 0.8
Tpm1P58771 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Tpm1P58771 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.04■□□□□ 0.8
Tpm1P58771 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tpm1P58771 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
Tpm1P58771 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tpm1P58771 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
Tpm1P58771 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC20.02■□□□□ 0.8
Tpm1P58771 Gm43173-201ENSMUST00000202246 593 ntBASIC20.02■□□□□ 0.8
Tpm1P58771 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
Tpm1P58771 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tpm1P58771 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Tpm1P58771 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.79
Tpm1P58771 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tpm1P58771 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.02■□□□□ 0.79
Tpm1P58771 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Tpm1P58771 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tpm1P58771 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.01■□□□□ 0.79
Tpm1P58771 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Tpm1P58771 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.01■□□□□ 0.79
Tpm1P58771 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC20.01■□□□□ 0.79
Tpm1P58771 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Tpm1P58771 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC20■□□□□ 0.79
Tpm1P58771 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
Tpm1P58771 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tpm1P58771 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tpm1P58771 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tpm1P58771 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tpm1P58771 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC20■□□□□ 0.79
Tpm1P58771 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tpm1P58771 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Tpm1P58771 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC20■□□□□ 0.79
Tpm1P58771 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20■□□□□ 0.79
Tpm1P58771 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Tpm1P58771 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20■□□□□ 0.79
Tpm1P58771 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
Tpm1P58771 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.99■□□□□ 0.79
Tpm1P58771 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Tpm1P58771 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.99■□□□□ 0.79
Tpm1P58771 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC19.99■□□□□ 0.79
Tpm1P58771 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Tpm1P58771 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Tpm1P58771 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
Tpm1P58771 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
Tpm1P58771 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Tpm1P58771 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Tpm1P58771 Gm38205-201ENSMUST00000192243 258 ntBASIC19.98■□□□□ 0.79
Tpm1P58771 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms