Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.12■□□□□ 0.65
NrlP54846 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
NrlP54846 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC19.11■□□□□ 0.65
NrlP54846 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
NrlP54846 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.11■□□□□ 0.65
NrlP54846 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NrlP54846 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NrlP54846 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
NrlP54846 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
NrlP54846 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NrlP54846 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
NrlP54846 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
NrlP54846 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NrlP54846 Gm7712-202ENSMUST00000222331 1510 ntBASIC19.1■□□□□ 0.65
NrlP54846 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
NrlP54846 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NrlP54846 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.1■□□□□ 0.65
NrlP54846 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NrlP54846 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.1■□□□□ 0.65
NrlP54846 Gm13559-201ENSMUST00000120476 863 ntBASIC19.1■□□□□ 0.65
NrlP54846 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NrlP54846 Mir6349-201ENSMUST00000184059 97 ntBASIC19.1■□□□□ 0.65
NrlP54846 Timm23-208ENSMUST00000226683 750 ntBASIC19.1■□□□□ 0.65
NrlP54846 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NrlP54846 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
NrlP54846 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
NrlP54846 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NrlP54846 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.1■□□□□ 0.65
NrlP54846 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
NrlP54846 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NrlP54846 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
NrlP54846 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
NrlP54846 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
NrlP54846 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
NrlP54846 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.08■□□□□ 0.65
NrlP54846 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.65
NrlP54846 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NrlP54846 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NrlP54846 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
NrlP54846 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.08■□□□□ 0.65
NrlP54846 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
NrlP54846 Gm12382-201ENSMUST00000122005 922 ntBASIC19.08■□□□□ 0.64
NrlP54846 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
NrlP54846 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NrlP54846 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NrlP54846 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NrlP54846 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NrlP54846 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NrlP54846 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
NrlP54846 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
NrlP54846 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
NrlP54846 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC19.07■□□□□ 0.64
NrlP54846 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.07■□□□□ 0.64
NrlP54846 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC19.07■□□□□ 0.64
NrlP54846 Gm11539-201ENSMUST00000119837 557 ntBASIC19.07■□□□□ 0.64
NrlP54846 Gm13436-201ENSMUST00000120418 567 ntBASIC19.07■□□□□ 0.64
NrlP54846 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
NrlP54846 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC19.06■□□□□ 0.64
NrlP54846 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NrlP54846 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
NrlP54846 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.06■□□□□ 0.64
NrlP54846 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.06■□□□□ 0.64
NrlP54846 Gm3375-201ENSMUST00000203929 796 ntBASIC19.06■□□□□ 0.64
NrlP54846 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.06■□□□□ 0.64
NrlP54846 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NrlP54846 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NrlP54846 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
NrlP54846 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
NrlP54846 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.05■□□□□ 0.64
NrlP54846 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC19.05■□□□□ 0.64
NrlP54846 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NrlP54846 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
NrlP54846 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NrlP54846 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC19.05■□□□□ 0.64
NrlP54846 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.05■□□□□ 0.64
NrlP54846 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
NrlP54846 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NrlP54846 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
NrlP54846 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
NrlP54846 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms