Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atxn1P54254 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atxn1P54254 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Atxn1P54254 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC17.77■□□□□ 0.44
Atxn1P54254 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atxn1P54254 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
Atxn1P54254 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC17.77■□□□□ 0.44
Atxn1P54254 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atxn1P54254 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atxn1P54254 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Atxn1P54254 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
Atxn1P54254 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atxn1P54254 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atxn1P54254 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atxn1P54254 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atxn1P54254 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atxn1P54254 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Atxn1P54254 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Atxn1P54254 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Atxn1P54254 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Atxn1P54254 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 Gm43231-201ENSMUST00000202960 2258 ntBASIC17.76■□□□□ 0.43
Atxn1P54254 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Atxn1P54254 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 AC126028.2-201ENSMUST00000228100 1833 ntBASIC17.76■□□□□ 0.43
Atxn1P54254 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.76■□□□□ 0.43
Atxn1P54254 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Atxn1P54254 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Atxn1P54254 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC17.75■□□□□ 0.43
Atxn1P54254 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC17.75■□□□□ 0.43
Atxn1P54254 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.75■□□□□ 0.43
Atxn1P54254 AC160393.1-201ENSMUST00000218378 1279 ntBASIC17.75■□□□□ 0.43
Atxn1P54254 Gm18032-201ENSMUST00000222541 538 ntBASIC17.75■□□□□ 0.43
Atxn1P54254 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Atxn1P54254 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Atxn1P54254 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Atxn1P54254 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atxn1P54254 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atxn1P54254 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atxn1P54254 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atxn1P54254 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atxn1P54254 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atxn1P54254 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.74■□□□□ 0.43
Atxn1P54254 Gm12382-201ENSMUST00000122005 922 ntBASIC17.74■□□□□ 0.43
Atxn1P54254 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
Atxn1P54254 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.74■□□□□ 0.43
Atxn1P54254 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.74■□□□□ 0.43
Atxn1P54254 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Atxn1P54254 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atxn1P54254 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
Atxn1P54254 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Atxn1P54254 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atxn1P54254 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.73■□□□□ 0.43
Atxn1P54254 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atxn1P54254 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atxn1P54254 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atxn1P54254 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Atxn1P54254 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.73■□□□□ 0.43
Atxn1P54254 Gm25925-201ENSMUST00000158314 306 ntBASIC17.73■□□□□ 0.43
Atxn1P54254 Gm17971-201ENSMUST00000190239 806 ntBASIC17.73■□□□□ 0.43
Atxn1P54254 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.73■□□□□ 0.43
Atxn1P54254 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.73■□□□□ 0.43
Atxn1P54254 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.73■□□□□ 0.43
Atxn1P54254 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Atxn1P54254 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.72■□□□□ 0.43
Atxn1P54254 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Atxn1P54254 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
Atxn1P54254 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Atxn1P54254 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.72■□□□□ 0.43
Atxn1P54254 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Atxn1P54254 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Atxn1P54254 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.72■□□□□ 0.43
Atxn1P54254 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Atxn1P54254 Gm19094-201ENSMUST00000209791 1246 ntBASIC17.72■□□□□ 0.43
Atxn1P54254 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC17.72■□□□□ 0.43
Atxn1P54254 Gm18025-201ENSMUST00000221733 862 ntBASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms