Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.9□□□□□ -0.02
Nkx2-1P50220 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Nkx2-1P50220 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC14.89□□□□□ -0.03
Nkx2-1P50220 Mir7075-201ENSMUST00000184187 82 ntBASIC14.89□□□□□ -0.03
Nkx2-1P50220 AC137127.1-201ENSMUST00000213466 1078 ntBASIC14.89□□□□□ -0.03
Nkx2-1P50220 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
Nkx2-1P50220 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.88□□□□□ -0.03
Nkx2-1P50220 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.88□□□□□ -0.03
Nkx2-1P50220 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Nkx2-1P50220 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
Nkx2-1P50220 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-1P50220 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Gm27454-201ENSMUST00000185090 204 ntBASIC14.86□□□□□ -0.03
Nkx2-1P50220 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.86□□□□□ -0.03
Nkx2-1P50220 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Gm37194-201ENSMUST00000193092 3031 ntBASIC14.86□□□□□ -0.03
Nkx2-1P50220 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 AC165080.2-201ENSMUST00000217491 1530 ntBASIC14.86□□□□□ -0.03
Nkx2-1P50220 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Nkx2-1P50220 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Nkx2-1P50220 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms