Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx2P48379 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rfx2P48379 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.78■□□□□ 0.6
Rfx2P48379 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Gm8309-201ENSMUST00000206627 1448 ntBASIC18.78■□□□□ 0.6
Rfx2P48379 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC18.78■□□□□ 0.6
Rfx2P48379 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.78■□□□□ 0.6
Rfx2P48379 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rfx2P48379 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rfx2P48379 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Rfx2P48379 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rfx2P48379 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx2P48379 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx2P48379 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx2P48379 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx2P48379 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx2P48379 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
Rfx2P48379 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rfx2P48379 Mir6982-201ENSMUST00000184354 68 ntBASIC18.77■□□□□ 0.6
Rfx2P48379 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.77■□□□□ 0.6
Rfx2P48379 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx2P48379 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx2P48379 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC18.77■□□□□ 0.6
Rfx2P48379 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Rfx2P48379 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx2P48379 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.77■□□□□ 0.59
Rfx2P48379 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx2P48379 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx2P48379 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx2P48379 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx2P48379 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Rfx2P48379 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.76■□□□□ 0.59
Rfx2P48379 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.76■□□□□ 0.59
Rfx2P48379 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC18.76■□□□□ 0.59
Rfx2P48379 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.76■□□□□ 0.59
Rfx2P48379 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rfx2P48379 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.75■□□□□ 0.59
Rfx2P48379 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx2P48379 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx2P48379 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Rfx2P48379 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.75■□□□□ 0.59
Rfx2P48379 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.75■□□□□ 0.59
Rfx2P48379 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx2P48379 Arpc4-202ENSMUST00000171058 695 ntTSL 5 BASIC18.75■□□□□ 0.59
Rfx2P48379 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx2P48379 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Rfx2P48379 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx2P48379 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Rfx2P48379 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rfx2P48379 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.74■□□□□ 0.59
Rfx2P48379 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Gm11927-201ENSMUST00000118472 759 ntBASIC18.74■□□□□ 0.59
Rfx2P48379 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.74■□□□□ 0.59
Rfx2P48379 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Rfx2P48379 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.74■□□□□ 0.59
Rfx2P48379 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rfx2P48379 Gm43702-201ENSMUST00000198772 2546 ntBASIC18.73■□□□□ 0.59
Rfx2P48379 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx2P48379 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx2P48379 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx2P48379 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx2P48379 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx2P48379 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx2P48379 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx2P48379 Gm10698-201ENSMUST00000182663 604 ntBASIC18.73■□□□□ 0.59
Rfx2P48379 Mir7071-201ENSMUST00000184847 69 ntBASIC18.73■□□□□ 0.59
Rfx2P48379 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rfx2P48379 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Rfx2P48379 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Rfx2P48379 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.73■□□□□ 0.59
Rfx2P48379 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC18.72■□□□□ 0.59
Rfx2P48379 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms