Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC20.12■□□□□ 0.81
Sdc2P43407 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc2P43407 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc2P43407 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc2P43407 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC20.12■□□□□ 0.81
Sdc2P43407 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC20.12■□□□□ 0.81
Sdc2P43407 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Sdc2P43407 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc2P43407 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc2P43407 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Sdc2P43407 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC20.11■□□□□ 0.81
Sdc2P43407 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sdc2P43407 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Sdc2P43407 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Sdc2P43407 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Sdc2P43407 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
Sdc2P43407 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 AV356131-201ENSMUST00000206201 750 ntBASIC20.1■□□□□ 0.81
Sdc2P43407 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC20.1■□□□□ 0.81
Sdc2P43407 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Sdc2P43407 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc2P43407 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc2P43407 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Sdc2P43407 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc2P43407 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.09■□□□□ 0.81
Sdc2P43407 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc2P43407 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc2P43407 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc2P43407 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Sdc2P43407 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
Sdc2P43407 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sdc2P43407 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Sdc2P43407 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Sdc2P43407 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Sdc2P43407 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.08■□□□□ 0.81
Sdc2P43407 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.08■□□□□ 0.81
Sdc2P43407 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sdc2P43407 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sdc2P43407 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sdc2P43407 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sdc2P43407 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Sdc2P43407 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC20.07■□□□□ 0.8
Sdc2P43407 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC20.07■□□□□ 0.8
Sdc2P43407 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.07■□□□□ 0.8
Sdc2P43407 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC20.07■□□□□ 0.8
Sdc2P43407 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Sdc2P43407 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc2P43407 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc2P43407 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc2P43407 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc2P43407 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc2P43407 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.06■□□□□ 0.8
Sdc2P43407 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Sdc2P43407 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.06■□□□□ 0.8
Sdc2P43407 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC20.06■□□□□ 0.8
Sdc2P43407 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc2P43407 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Sdc2P43407 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Sdc2P43407 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Sdc2P43407 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
Sdc2P43407 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC20.05■□□□□ 0.8
Sdc2P43407 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.05■□□□□ 0.8
Sdc2P43407 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Sdc2P43407 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.05■□□□□ 0.8
Sdc2P43407 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms