Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
RxrbP28704 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
RxrbP28704 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RxrbP28704 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
RxrbP28704 Idnk-204ENSMUST00000226010 1898 ntBASIC18.04■□□□□ 0.48
RxrbP28704 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RxrbP28704 Gm43017-201ENSMUST00000198296 752 ntBASIC18.04■□□□□ 0.48
RxrbP28704 Gm43060-201ENSMUST00000200621 289 ntBASIC18.04■□□□□ 0.48
RxrbP28704 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RxrbP28704 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC18.04■□□□□ 0.48
RxrbP28704 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RxrbP28704 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RxrbP28704 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
RxrbP28704 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
RxrbP28704 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
RxrbP28704 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.03■□□□□ 0.48
RxrbP28704 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RxrbP28704 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC18.03■□□□□ 0.48
RxrbP28704 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.03■□□□□ 0.48
RxrbP28704 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC18.03■□□□□ 0.48
RxrbP28704 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.03■□□□□ 0.48
RxrbP28704 Gm40848-201ENSMUST00000221998 324 ntBASIC18.03■□□□□ 0.48
RxrbP28704 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
RxrbP28704 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RxrbP28704 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
RxrbP28704 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.02■□□□□ 0.48
RxrbP28704 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
RxrbP28704 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
RxrbP28704 Gm38345-201ENSMUST00000192635 1748 ntBASIC18.02■□□□□ 0.48
RxrbP28704 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
RxrbP28704 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
RxrbP28704 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.47
RxrbP28704 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RxrbP28704 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
RxrbP28704 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RxrbP28704 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RxrbP28704 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC18.01■□□□□ 0.47
RxrbP28704 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
RxrbP28704 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
RxrbP28704 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC18■□□□□ 0.47
RxrbP28704 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18■□□□□ 0.47
RxrbP28704 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18■□□□□ 0.47
RxrbP28704 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC18■□□□□ 0.47
RxrbP28704 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC17.99■□□□□ 0.47
RxrbP28704 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RxrbP28704 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
RxrbP28704 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
RxrbP28704 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
RxrbP28704 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
RxrbP28704 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RxrbP28704 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RxrbP28704 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
RxrbP28704 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RxrbP28704 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RxrbP28704 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
RxrbP28704 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms