Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.5■□□□□ 0.71
Pde6bP23440 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Pde6bP23440 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Pde6bP23440 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Pde6bP23440 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
Pde6bP23440 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.49■□□□□ 0.71
Pde6bP23440 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.49■□□□□ 0.71
Pde6bP23440 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Pde6bP23440 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Pde6bP23440 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
Pde6bP23440 Gm6433-201ENSMUST00000118634 875 ntBASIC19.48■□□□□ 0.71
Pde6bP23440 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Pde6bP23440 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Pde6bP23440 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6bP23440 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
Pde6bP23440 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6bP23440 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6bP23440 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.47■□□□□ 0.71
Pde6bP23440 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6bP23440 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6bP23440 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6bP23440 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6bP23440 Gm43799-201ENSMUST00000201845 579 ntBASIC19.47■□□□□ 0.71
Pde6bP23440 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.47■□□□□ 0.71
Pde6bP23440 AC130671.1-201ENSMUST00000227384 1237 ntBASIC19.47■□□□□ 0.71
Pde6bP23440 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6bP23440 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Pde6bP23440 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Pde6bP23440 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Pde6bP23440 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.46■□□□□ 0.71
Pde6bP23440 Mir6349-201ENSMUST00000184059 97 ntBASIC19.46■□□□□ 0.71
Pde6bP23440 Gm37805-201ENSMUST00000192612 1094 ntBASIC19.46■□□□□ 0.71
Pde6bP23440 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.46■□□□□ 0.71
Pde6bP23440 Arhgef4-208ENSMUST00000211073 171 ntBASIC19.46■□□□□ 0.71
Pde6bP23440 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.46■□□□□ 0.71
Pde6bP23440 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Pde6bP23440 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC19.45■□□□□ 0.7
Pde6bP23440 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Gm37292-201ENSMUST00000192062 758 ntBASIC19.45■□□□□ 0.7
Pde6bP23440 Gm21814-202ENSMUST00000203277 873 ntBASIC19.45■□□□□ 0.7
Pde6bP23440 AC156016.1-201ENSMUST00000227190 1035 ntBASIC19.45■□□□□ 0.7
Pde6bP23440 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pde6bP23440 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.45■□□□□ 0.7
Pde6bP23440 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
Pde6bP23440 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Pde6bP23440 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms