Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxd3P09027 Gm6576-201ENSMUST00000169678 883 ntBASIC13.92□□□□□ -0.18
Hoxd3P09027 Gm10138-203ENSMUST00000206952 366 ntBASIC13.92□□□□□ -0.18
Hoxd3P09027 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxd3P09027 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.92□□□□□ -0.18
Hoxd3P09027 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxd3P09027 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxd3P09027 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxd3P09027 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxd3P09027 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxd3P09027 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxd3P09027 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Hoxd3P09027 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Gm45906-201ENSMUST00000208911 1430 ntBASIC13.91□□□□□ -0.18
Hoxd3P09027 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Hoxd3P09027 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.91□□□□□ -0.18
Hoxd3P09027 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxd3P09027 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
Hoxd3P09027 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxd3P09027 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Gm9885-202ENSMUST00000186234 2209 ntBASIC13.91□□□□□ -0.18
Hoxd3P09027 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Hoxd3P09027 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
Hoxd3P09027 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Hoxd3P09027 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Hoxd3P09027 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Hoxd3P09027 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.9□□□□□ -0.18
Hoxd3P09027 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC13.9□□□□□ -0.18
Hoxd3P09027 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC13.9□□□□□ -0.18
Hoxd3P09027 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Hoxd3P09027 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC13.9□□□□□ -0.18
Hoxd3P09027 Gm5784-201ENSMUST00000179344 2478 ntBASIC13.9□□□□□ -0.18
Hoxd3P09027 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Hoxd3P09027 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Hoxd3P09027 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Hoxd3P09027 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC13.89□□□□□ -0.19
Hoxd3P09027 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxd3P09027 AC153881.1-201ENSMUST00000214448 284 ntBASIC13.89□□□□□ -0.19
Hoxd3P09027 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Hoxd3P09027 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC13.89□□□□□ -0.19
Hoxd3P09027 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC13.88□□□□□ -0.19
Hoxd3P09027 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.88□□□□□ -0.19
Hoxd3P09027 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Gm15375-201ENSMUST00000119510 849 ntBASIC13.88□□□□□ -0.19
Hoxd3P09027 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Gm19891-201ENSMUST00000189771 303 ntBASIC13.88□□□□□ -0.19
Hoxd3P09027 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC13.88□□□□□ -0.19
Hoxd3P09027 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC13.88□□□□□ -0.19
Hoxd3P09027 Rpl7-201ENSMUST00000058437 1163 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Hoxd3P09027 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxd3P09027 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxd3P09027 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Hoxd3P09027 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms