Protein–RNA interactions for Protein: P07903

Ercc1, DNA excision repair protein ERCC-1, mousemouse

Predictions only

Length 298 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1P07903 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC15.03■□□□□ -0
Ercc1P07903 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ercc1P07903 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Ercc1P07903 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Ercc1P07903 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC15.02■□□□□ -0
Ercc1P07903 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC15.02■□□□□ -0
Ercc1P07903 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Ercc1P07903 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC15.02■□□□□ -0
Ercc1P07903 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc1P07903 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc1P07903 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc1P07903 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Ercc1P07903 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
Ercc1P07903 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Ercc1P07903 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC15.01□□□□□ -0.01
Ercc1P07903 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC15.01□□□□□ -0.01
Ercc1P07903 Gm21956-201ENSMUST00000179946 522 ntBASIC15.01□□□□□ -0.01
Ercc1P07903 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC15.01□□□□□ -0.01
Ercc1P07903 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Ercc1P07903 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Ercc1P07903 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Mir7075-201ENSMUST00000184187 82 ntBASIC15□□□□□ -0.01
Ercc1P07903 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC15□□□□□ -0.01
Ercc1P07903 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC15□□□□□ -0.01
Ercc1P07903 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Ercc1P07903 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Ercc1P07903 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC15□□□□□ -0.01
Ercc1P07903 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ercc1P07903 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ercc1P07903 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc1P07903 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc1P07903 Gm8493-201ENSMUST00000196881 489 ntBASIC14.99□□□□□ -0.01
Ercc1P07903 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc1P07903 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc1P07903 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc1P07903 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ercc1P07903 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc1P07903 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc1P07903 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ercc1P07903 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.98□□□□□ -0.01
Ercc1P07903 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.98□□□□□ -0.01
Ercc1P07903 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ercc1P07903 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ercc1P07903 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.98□□□□□ -0.01
Ercc1P07903 Gm27032-201ENSMUST00000183124 1116 ntBASIC14.98□□□□□ -0.01
Ercc1P07903 Gm27454-201ENSMUST00000185090 204 ntBASIC14.98□□□□□ -0.01
Ercc1P07903 Gm37805-201ENSMUST00000192612 1094 ntBASIC14.98□□□□□ -0.01
Ercc1P07903 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Ercc1P07903 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.98□□□□□ -0.01
Ercc1P07903 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
Ercc1P07903 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ercc1P07903 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ercc1P07903 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ercc1P07903 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.97□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms