Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
P01852 Gm15847-201ENSMUST00000121417 1065 ntBASIC16.4■□□□□ 0.22
P01852 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC16.4■□□□□ 0.22
P01852 AC135637.1-201ENSMUST00000227750 365 ntBASIC16.4■□□□□ 0.22
P01852 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.4■□□□□ 0.22
P01852 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
P01852 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.4■□□□□ 0.22
P01852 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
P01852 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P01852 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.39■□□□□ 0.21
P01852 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P01852 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P01852 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.39■□□□□ 0.21
P01852 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC16.39■□□□□ 0.21
P01852 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
P01852 Gm27275-201ENSMUST00000184318 272 ntBASIC16.39■□□□□ 0.21
P01852 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P01852 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
P01852 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC16.39■□□□□ 0.21
P01852 Gm21596-201ENSMUST00000178049 1316 ntBASIC16.39■□□□□ 0.21
P01852 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P01852 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
P01852 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
P01852 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
P01852 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
P01852 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Frmd3-202ENSMUST00000098006 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Gm44878-201ENSMUST00000205812 1295 ntBASIC16.37■□□□□ 0.21
P01852 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC16.37■□□□□ 0.21
P01852 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P01852 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.37■□□□□ 0.21
P01852 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
P01852 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01852 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01852 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01852 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01852 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01852 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.36■□□□□ 0.21
P01852 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01852 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01852 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P01852 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
P01852 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.36■□□□□ 0.21
P01852 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
P01852 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
P01852 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC16.35■□□□□ 0.21
P01852 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
P01852 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
P01852 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.35■□□□□ 0.21
P01852 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.35■□□□□ 0.21
P01852 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P01852 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01852 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
P01852 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01852 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01852 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
P01852 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01852 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P01852 Gm11249-201ENSMUST00000117071 859 ntBASIC16.34■□□□□ 0.21
P01852 Gm8520-201ENSMUST00000186517 868 ntBASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms