Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC17.18■□□□□ 0.34
Hcn3O88705 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn3O88705 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC17.18■□□□□ 0.34
Hcn3O88705 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hcn3O88705 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hcn3O88705 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
Hcn3O88705 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.17■□□□□ 0.34
Hcn3O88705 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hcn3O88705 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC17.16■□□□□ 0.34
Hcn3O88705 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
Hcn3O88705 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Hcn3O88705 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.16■□□□□ 0.34
Hcn3O88705 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hcn3O88705 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Hcn3O88705 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.16■□□□□ 0.34
Hcn3O88705 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
Hcn3O88705 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Hcn3O88705 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC17.16■□□□□ 0.34
Hcn3O88705 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.16■□□□□ 0.34
Hcn3O88705 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hcn3O88705 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.15■□□□□ 0.34
Hcn3O88705 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Gm37805-201ENSMUST00000192612 1094 ntBASIC17.15■□□□□ 0.34
Hcn3O88705 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
Hcn3O88705 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hcn3O88705 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
Hcn3O88705 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hcn3O88705 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hcn3O88705 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Hcn3O88705 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.14■□□□□ 0.33
Hcn3O88705 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hcn3O88705 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Hcn3O88705 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Hcn3O88705 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.14■□□□□ 0.33
Hcn3O88705 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
Hcn3O88705 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hcn3O88705 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn3O88705 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn3O88705 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn3O88705 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC17.13■□□□□ 0.33
Hcn3O88705 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Hcn3O88705 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.13■□□□□ 0.33
Hcn3O88705 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn3O88705 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn3O88705 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Hcn3O88705 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC17.13■□□□□ 0.33
Hcn3O88705 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Hcn3O88705 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Hcn3O88705 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Hcn3O88705 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC17.12■□□□□ 0.33
Hcn3O88705 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms