Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Col15a1O35206 Gm16061-201ENSMUST00000122167 857 ntBASIC23.12■■□□□ 1.29
Col15a1O35206 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC23.12■■□□□ 1.29
Col15a1O35206 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col15a1O35206 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
Col15a1O35206 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.12■■□□□ 1.29
Col15a1O35206 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col15a1O35206 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col15a1O35206 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col15a1O35206 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
Col15a1O35206 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC23.11■■□□□ 1.29
Col15a1O35206 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col15a1O35206 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC23.11■■□□□ 1.29
Col15a1O35206 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col15a1O35206 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Col15a1O35206 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col15a1O35206 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col15a1O35206 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Col15a1O35206 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col15a1O35206 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col15a1O35206 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col15a1O35206 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
Col15a1O35206 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC23.1■■□□□ 1.29
Col15a1O35206 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col15a1O35206 Gm9103-201ENSMUST00000119371 405 ntBASIC23.1■■□□□ 1.29
Col15a1O35206 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC23.1■■□□□ 1.29
Col15a1O35206 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col15a1O35206 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
Col15a1O35206 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC23.1■■□□□ 1.29
Col15a1O35206 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col15a1O35206 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC23.09■■□□□ 1.29
Col15a1O35206 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
Col15a1O35206 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col15a1O35206 Gm8258-201ENSMUST00000055593 1449 ntBASIC23.09■■□□□ 1.29
Col15a1O35206 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col15a1O35206 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col15a1O35206 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col15a1O35206 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col15a1O35206 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
Col15a1O35206 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Col15a1O35206 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col15a1O35206 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col15a1O35206 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col15a1O35206 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col15a1O35206 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Col15a1O35206 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
Col15a1O35206 Gm17661-201ENSMUST00000170317 270 ntBASIC23.08■■□□□ 1.29
Col15a1O35206 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC23.08■■□□□ 1.29
Col15a1O35206 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Col15a1O35206 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col15a1O35206 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col15a1O35206 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Col15a1O35206 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col15a1O35206 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col15a1O35206 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col15a1O35206 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Col15a1O35206 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col15a1O35206 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Col15a1O35206 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Col15a1O35206 Tgds-204ENSMUST00000228543 1594 ntBASIC23.07■■□□□ 1.28
Col15a1O35206 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col15a1O35206 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Col15a1O35206 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
Col15a1O35206 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col15a1O35206 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC23.06■■□□□ 1.28
Col15a1O35206 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col15a1O35206 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
Col15a1O35206 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Col15a1O35206 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC23.06■■□□□ 1.28
Col15a1O35206 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col15a1O35206 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col15a1O35206 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Col15a1O35206 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Col15a1O35206 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col15a1O35206 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Col15a1O35206 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
Col15a1O35206 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC23.05■■□□□ 1.28
Col15a1O35206 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col15a1O35206 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col15a1O35206 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col15a1O35206 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Col15a1O35206 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col15a1O35206 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col15a1O35206 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col15a1O35206 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Col15a1O35206 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC23.05■■□□□ 1.28
Col15a1O35206 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Col15a1O35206 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col15a1O35206 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Col15a1O35206 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col15a1O35206 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
Col15a1O35206 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Col15a1O35206 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC23.04■■□□□ 1.28
Col15a1O35206 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col15a1O35206 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col15a1O35206 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
Col15a1O35206 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col15a1O35206 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col15a1O35206 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Col15a1O35206 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms