Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Gfra3O35118 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.5■□□□□ 0.07
Gfra3O35118 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.49■□□□□ 0.07
Gfra3O35118 AC121961.1-201ENSMUST00000218594 1779 ntBASIC15.49■□□□□ 0.07
Gfra3O35118 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gfra3O35118 Gm38345-201ENSMUST00000192635 1748 ntBASIC15.49■□□□□ 0.07
Gfra3O35118 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC15.49■□□□□ 0.07
Gfra3O35118 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.49■□□□□ 0.07
Gfra3O35118 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gfra3O35118 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Gfra3O35118 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gfra3O35118 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gfra3O35118 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Gfra3O35118 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Gfra3O35118 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Gfra3O35118 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gfra3O35118 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Gfra3O35118 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gfra3O35118 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Gfra3O35118 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gfra3O35118 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gfra3O35118 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
Gfra3O35118 Gm10138-203ENSMUST00000206952 366 ntBASIC15.48■□□□□ 0.07
Gfra3O35118 Gm10252-201ENSMUST00000209541 832 ntBASIC15.48■□□□□ 0.07
Gfra3O35118 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Gfra3O35118 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.48■□□□□ 0.07
Gfra3O35118 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gfra3O35118 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Gfra3O35118 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gfra3O35118 Gm6627-201ENSMUST00000218299 2386 ntBASIC15.48■□□□□ 0.07
Gfra3O35118 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Gfra3O35118 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Gm43182-201ENSMUST00000199476 2528 ntBASIC15.47■□□□□ 0.07
Gfra3O35118 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Gfra3O35118 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.47■□□□□ 0.07
Gfra3O35118 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Gfra3O35118 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC15.47■□□□□ 0.07
Gfra3O35118 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Gfra3O35118 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Gfra3O35118 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gfra3O35118 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.46■□□□□ 0.07
Gfra3O35118 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gfra3O35118 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.46■□□□□ 0.07
Gfra3O35118 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gfra3O35118 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC15.46■□□□□ 0.07
Gfra3O35118 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC15.46■□□□□ 0.07
Gfra3O35118 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.07
Gfra3O35118 AC154649.1-201ENSMUST00000227392 384 ntBASIC15.46■□□□□ 0.07
Gfra3O35118 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gfra3O35118 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Gfra3O35118 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Gfra3O35118 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
Gfra3O35118 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Gm15375-201ENSMUST00000119510 849 ntBASIC15.45■□□□□ 0.06
Gfra3O35118 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC15.45■□□□□ 0.06
Gfra3O35118 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.45■□□□□ 0.06
Gfra3O35118 Arhgef33-211ENSMUST00000225658 473 ntBASIC15.45■□□□□ 0.06
Gfra3O35118 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
Gfra3O35118 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Gfra3O35118 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Shroom3-211ENSMUST00000225438 5742 ntBASIC15.45■□□□□ 0.06
Gfra3O35118 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.45■□□□□ 0.06
Gfra3O35118 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Gfra3O35118 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gfra3O35118 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Gfra3O35118 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gfra3O35118 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gfra3O35118 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
Gfra3O35118 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
Gfra3O35118 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
Gfra3O35118 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Gfra3O35118 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms