Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.8■□□□□ 0.12
Trav13d-3J3QMG8 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Gm38285-201ENSMUST00000192928 922 ntBASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav13d-3J3QMG8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Zfp783-201ENSMUST00000095946 670 ntBASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Trav13d-3J3QMG8 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.77■□□□□ 0.12
Trav13d-3J3QMG8 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13d-3J3QMG8 Flg-201ENSMUST00000050758 1488 ntBASIC15.77■□□□□ 0.11
Trav13d-3J3QMG8 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13d-3J3QMG8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Trav13d-3J3QMG8 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Gm4968-201ENSMUST00000071458 858 ntBASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trav13d-3J3QMG8 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trav13d-3J3QMG8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trav13d-3J3QMG8 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav13d-3J3QMG8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms