Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 AV356131-201ENSMUST00000206201 750 ntBASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Gm28043E0CXC2 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Gm28043E0CXC2 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Gm26571-201ENSMUST00000181399 666 ntBASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
Gm28043E0CXC2 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Ap3s1-204ENSMUST00000225520 957 ntBASIC17.96■□□□□ 0.47
Gm28043E0CXC2 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Gm28043E0CXC2 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Gm28043E0CXC2 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms