Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm13241-201ENSMUST00000094493 780 ntBASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
Igkv1-88A0A140T8N1 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm43213-201ENSMUST00000151866 1790 ntBASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm43034-201ENSMUST00000198678 1364 ntBASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Igkv1-88A0A140T8N1 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Lrrfip2-202ENSMUST00000098340 3191 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm37811-201ENSMUST00000192416 2601 ntBASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Wdr70-203ENSMUST00000227371 1130 ntBASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
Igkv1-88A0A140T8N1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 CT030146.1-201ENSMUST00000220919 217 ntBASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm40848-201ENSMUST00000221998 324 ntBASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
Igkv1-88A0A140T8N1 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Igkv1-88A0A140T8N1 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms