Protein–RNA interactions for Protein: A0A140T8M6

Igkv3-5, Immunoglobulin kappa chain variable 3-5 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv3-5A0A140T8M6 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-5A0A140T8M6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-5A0A140T8M6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
Igkv3-5A0A140T8M6 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-5A0A140T8M6 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC11.33□□□□□ -0.6
Igkv3-5A0A140T8M6 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Igkv3-5A0A140T8M6 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-5A0A140T8M6 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
Igkv3-5A0A140T8M6 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.6
Igkv3-5A0A140T8M6 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm38205-201ENSMUST00000192243 258 ntBASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Yod1-201ENSMUST00000049813 6128 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
Igkv3-5A0A140T8M6 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm27032-201ENSMUST00000183124 1116 ntBASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm7856-201ENSMUST00000117514 1493 ntBASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC11.31□□□□□ -0.6
Igkv3-5A0A140T8M6 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Igkv3-5A0A140T8M6 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Echs1-201ENSMUST00000026538 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Igkv3-5A0A140T8M6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms