Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Unc13a-208ENSMUST00000177517 5654 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37194-201ENSMUST00000193092 3031 ntBASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Trav15d-2-dv6d-2A0A0G2JGQ7 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.71■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Idnk-204ENSMUST00000226010 1898 ntBASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Specc1-215ENSMUST00000202744 674 ntTSL 3 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm44544-201ENSMUST00000207052 1844 ntBASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Trav15d-2-dv6d-2A0A0G2JGQ7 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms