Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav9d-4A0A0G2JG37 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.3□□□□□ -0.44
Trav9d-4A0A0G2JG37 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Zkscan3-208ENSMUST00000224820 5398 ntBASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Gm9207-201ENSMUST00000198773 1115 ntBASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9d-4A0A0G2JG37 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 53.8 ms