Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav3n-3A0A0G2JEM0 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm45774-201ENSMUST00000211992 2665 ntBASIC13.57□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm8969-201ENSMUST00000199694 526 ntBASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm7160-202ENSMUST00000188519 1027 ntBASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav3n-3A0A0G2JEM0 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms