Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav11A0A0B4J1J9 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Gm27032-201ENSMUST00000183124 1116 ntBASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav11A0A0B4J1J9 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav11A0A0B4J1J9 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.43
Trav11A0A0B4J1J9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav11A0A0B4J1J9 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav11A0A0B4J1J9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav11A0A0B4J1J9 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 AC154231.1-201ENSMUST00000220564 2175 ntBASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Gm45244-201ENSMUST00000211328 2200 ntBASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Trav11A0A0B4J1J9 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
Trav11A0A0B4J1J9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms