Protein–RNA interactions for Protein: A0A0B4J1H4

Trbv19, T cell receptor beta, variable 19 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv19A0A0B4J1H4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trbv19A0A0B4J1H4 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 AV356131-201ENSMUST00000206201 750 ntBASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trbv19A0A0B4J1H4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trbv19A0A0B4J1H4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm37374-201ENSMUST00000194954 1829 ntBASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.39□□□□□ -0.11
Trbv19A0A0B4J1H4 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Shroom3-211ENSMUST00000225438 5742 ntBASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trbv19A0A0B4J1H4 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.37□□□□□ -0.11
Trbv19A0A0B4J1H4 Zcchc6-207ENSMUST00000225576 2499 ntBASIC14.36□□□□□ -0.11
Trbv19A0A0B4J1H4 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms