Protein–RNA interactions for Protein: A0A0B4J1H1

Trbv12-2, T cell receptor beta, variable 12-2 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv12-2A0A0B4J1H1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.21□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-2A0A0B4J1H1 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gm38205-201ENSMUST00000192243 258 ntBASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Sept4-206ENSMUST00000122067 1303 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gm45102-201ENSMUST00000207427 857 ntBASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Trbv12-2A0A0B4J1H1 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gm14117-201ENSMUST00000122417 843 ntBASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC14.16□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trbv12-2A0A0B4J1H1 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms