Protein–RNA interactions for Protein: A0A0A6YY41

Ighv1-47, Immunoglobulin heavy variable 1-47 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-47A0A0A6YY41 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14.84□□□□□ -0.03
Ighv1-47A0A0A6YY41 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-47A0A0A6YY41 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-47A0A0A6YY41 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-47A0A0A6YY41 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-47A0A0A6YY41 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Ighv1-47A0A0A6YY41 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ighv1-47A0A0A6YY41 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.84□□□□□ -0.03
Ighv1-47A0A0A6YY41 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-47A0A0A6YY41 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ighv1-47A0A0A6YY41 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gm42569-201ENSMUST00000200539 472 ntBASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ighv1-47A0A0A6YY41 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ighv1-47A0A0A6YY41 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gm10849-201ENSMUST00000100397 618 ntBASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gm26571-201ENSMUST00000181399 666 ntBASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Ighv1-47A0A0A6YY41 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Gm43672-201ENSMUST00000199072 1731 ntBASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Ighv1-47A0A0A6YY41 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Ighv1-47A0A0A6YY41 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms