Protein–RNA interactions for Protein: A0A0A6YXG2

Ighv1-56, Immunoglobulin heavy variable 1-56 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-56A0A0A6YXG2 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Tgds-204ENSMUST00000228543 1594 ntBASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Gm8969-201ENSMUST00000199694 526 ntBASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ighv1-56A0A0A6YXG2 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms