Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav6d-5A0A075B6B9 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav6d-5A0A075B6B9 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Trav6d-5A0A075B6B9 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Rps24-207ENSMUST00000224568 714 ntBASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Trav6d-5A0A075B6B9 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Haglr-201ENSMUST00000100000 2085 ntBASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.5□□□□□ -0.09
Trav6d-5A0A075B6B9 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Idnk-204ENSMUST00000226010 1898 ntBASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Trav6d-5A0A075B6B9 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Trav6d-5A0A075B6B9 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms