Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Trav12d-3A0A075B6A4 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Trav12d-3A0A075B6A4 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Gm16401-202ENSMUST00000197463 2074 ntBASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.41□□□□□ -0.26
Trav12d-3A0A075B6A4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Gm37805-201ENSMUST00000192612 1094 ntBASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Trav12d-3A0A075B6A4 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Gm40881-201ENSMUST00000223397 166 ntBASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Trav12d-3A0A075B6A4 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Gm26596-201ENSMUST00000180464 2655 ntBASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Shroom3-211ENSMUST00000225438 5742 ntBASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Gm13216-201ENSMUST00000117145 591 ntBASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Krt8-ps-201ENSMUST00000208495 945 ntBASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Trav12d-3A0A075B6A4 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC13.38□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms