Protein–RNA interactions for Protein: A0A075B654

Trav3-4, T cell receptor alpha variable 3-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-4A0A075B654 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Trav3-4A0A075B654 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Trav3-4A0A075B654 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Trav3-4A0A075B654 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Gm16464-201ENSMUST00000117815 1095 ntBASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Gm43530-201ENSMUST00000195920 274 ntBASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 AC154266.1-201ENSMUST00000223190 503 ntBASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav3-4A0A075B654 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Gm7332-201ENSMUST00000118351 454 ntBASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav3-4A0A075B654 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms