Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Trav9n-4A0A075B631 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Fst-202ENSMUST00000223640 2612 ntBASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Gm13146-201ENSMUST00000118508 780 ntBASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Gm13234-201ENSMUST00000120010 747 ntBASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Gm42778-201ENSMUST00000199644 553 ntBASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 AC107452.1-201ENSMUST00000227963 481 ntBASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Gm38308-201ENSMUST00000194934 1809 ntBASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Trav9n-4A0A075B631 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 AC160393.1-201ENSMUST00000218378 1279 ntBASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Gm45606-201ENSMUST00000209836 2795 ntBASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Trav9n-4A0A075B631 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Gm13534-201ENSMUST00000121169 513 ntBASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Gm8309-201ENSMUST00000206627 1448 ntBASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Trav9n-4A0A075B631 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-4A0A075B631 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-4A0A075B631 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-4A0A075B631 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-4A0A075B631 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Trav9n-4A0A075B631 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
Trav9n-4A0A075B631 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-4A0A075B631 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-4A0A075B631 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Trav9n-4A0A075B631 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Trav9n-4A0A075B631 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-4A0A075B631 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-4A0A075B631 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-4A0A075B631 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC12.27□□□□□ -0.45
Trav9n-4A0A075B631 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Trav9n-4A0A075B631 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
Trav9n-4A0A075B631 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Trav9n-4A0A075B631 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25 ms