Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Slc3a1-201ENSMUST00000024944 2307 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Itgam-202ENSMUST00000106240 3325 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Sox6-212ENSMUST00000206369 2863 ntAPPRIS ALT2 TSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm43328-201ENSMUST00000198544 1434 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Gm43613-201ENSMUST00000199409 1613 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Spata1-206ENSMUST00000197980 1807 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Gm44101-201ENSMUST00000203951 2221 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Vmn1r50-203ENSMUST00000226577 2240 ntAPPRIS P1 BASIC7.08□□□□□ -1.28
Sox1P53783 Spag17os-201ENSMUST00000137776 2437 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm3149-202ENSMUST00000171810 1759 ntAPPRIS P5 TSL 5 BASIC7.08□□□□□ -1.28
Sox1P53783 Gm16344-201ENSMUST00000150084 1567 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 CT025675.1-201ENSMUST00000228171 1567 ntBASIC7.08□□□□□ -1.28
Sox1P53783 Pnisr-201ENSMUST00000029911 4545 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
Sox1P53783 Bdnf-211ENSMUST00000176893 3707 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 AC153945.1-201ENSMUST00000217761 1722 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Pknox2-202ENSMUST00000080754 3431 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Gm44022-201ENSMUST00000203708 5429 ntBASIC7.07□□□□□ -1.28
Sox1P53783 6530403H02Rik-202ENSMUST00000182124 3191 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Rnf213-203ENSMUST00000172235 2422 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 Gm42701-201ENSMUST00000196117 1657 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Ccdc60-201ENSMUST00000050178 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Gm26575-201ENSMUST00000181714 2232 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Dnase1-201ENSMUST00000006136 1480 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Gm42998-201ENSMUST00000197053 2371 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gm18248-201ENSMUST00000191164 1846 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gm43845-201ENSMUST00000202462 1820 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Mir697-201ENSMUST00000102316 109 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gp6-201ENSMUST00000108590 965 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Cd200r3-205ENSMUST00000114613 950 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Gm11624-201ENSMUST00000118579 1041 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gm13367-201ENSMUST00000119955 796 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gm13000-201ENSMUST00000120937 496 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 Skint1-204ENSMUST00000162158 1260 ntAPPRIS P2 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Gm8224-201ENSMUST00000166178 497 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Igkv13-82-201ENSMUST00000200308 346 ntBASIC7.07□□□□□ -1.28
Sox1P53783 AC120011.1-201ENSMUST00000202147 744 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gm5110-201ENSMUST00000203122 1063 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Olfr848-ps1-201ENSMUST00000212241 930 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gm39465-202ENSMUST00000215177 470 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 AC159472.1-201ENSMUST00000218178 463 ntBASIC7.07□□□□□ -1.28
Sox1P53783 AC117814.1-201ENSMUST00000226135 352 ntBASIC7.07□□□□□ -1.28
Sox1P53783 1700007K09Rik-201ENSMUST00000033146 360 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 Olfr1354-201ENSMUST00000075859 1095 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox1P53783 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gm33843-201ENSMUST00000219313 1637 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 4930510E17Rik-201ENSMUST00000034550 1639 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Gm43099-201ENSMUST00000198943 5241 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Olfr1320-202ENSMUST00000214273 1982 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 Gm44194-201ENSMUST00000204222 3229 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Gm14147-201ENSMUST00000109888 2681 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 Ccser1-201ENSMUST00000045522 2688 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 Gm37735-201ENSMUST00000193995 1406 ntBASIC7.07□□□□□ -1.28
Sox1P53783 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Olfr1299-202ENSMUST00000213511 1783 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 AC159301.1-202ENSMUST00000225860 2133 ntBASIC7.07□□□□□ -1.28
Sox1P53783 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC7.07□□□□□ -1.28
Sox1P53783 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 R3hdm2-203ENSMUST00000105249 3654 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
Sox1P53783 Gm5546-201ENSMUST00000056145 2777 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC7.07□□□□□ -1.28
Sox1P53783 Elavl4-207ENSMUST00000106603 3761 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
Sox1P53783 Cstf2t-201ENSMUST00000066039 3750 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
Sox1P53783 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox1P53783 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox1P53783 B3gnt5-207ENSMUST00000164397 4872 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox1P53783 Nif3l1-202ENSMUST00000114337 2168 ntTSL 2 BASIC7.06□□□□□ -1.28
Sox1P53783 Gmeb1-207ENSMUST00000168553 6523 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox1P53783 Ccdc80-202ENSMUST00000099498 3671 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox1P53783 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox1P53783 Dgkb-201ENSMUST00000040500 6373 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox1P53783 AC122356.1-202ENSMUST00000227328 2758 ntBASIC7.06□□□□□ -1.28
Sox1P53783 Irgm1-201ENSMUST00000049519 2259 ntAPPRIS P2 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox1P53783 Zfp106-201ENSMUST00000055241 9085 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox1P53783 Olfr1241-203ENSMUST00000215055 2441 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox1P53783 Arl15-201ENSMUST00000091201 3364 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
Sox1P53783 Gm2348-201ENSMUST00000108782 300 ntBASIC7.06□□□□□ -1.28
Sox1P53783 Gm12169-201ENSMUST00000109228 1065 ntAPPRIS P1 TSL 5 BASIC7.06□□□□□ -1.28
Sox1P53783 Gm11105-201ENSMUST00000112781 478 ntBASIC7.06□□□□□ -1.28
Sox1P53783 Olfr50-201ENSMUST00000112950 1157 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
Sox1P53783 Gm6429-201ENSMUST00000117144 475 ntBASIC7.06□□□□□ -1.28
Sox1P53783 Gm15854-201ENSMUST00000118879 808 ntBASIC7.06□□□□□ -1.28
Sox1P53783 Gm5390-201ENSMUST00000119069 1230 ntBASIC7.06□□□□□ -1.28
Sox1P53783 Gm11385-201ENSMUST00000121513 570 ntBASIC7.06□□□□□ -1.28
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms