Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm5023-201ENSMUST00000217442 587 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm10126-201ENSMUST00000221732 168 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 AC124489.1-201ENSMUST00000225852 526 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Vmn1r31-204ENSMUST00000226390 912 ntAPPRIS P2 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 AC122459.3-201ENSMUST00000228508 1042 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 1700102P08Rik-201ENSMUST00000035234 1101 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Olfr1503-ps1-201ENSMUST00000076614 803 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Irak3-205ENSMUST00000145665 2869 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm8734-201ENSMUST00000211669 1312 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Bcl2l11-203ENSMUST00000103210 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Lnpep-201ENSMUST00000041047 5181 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Trrap-215ENSMUST00000213013 12398 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Ctage5-223ENSMUST00000219140 4194 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Efl1-201ENSMUST00000039881 3610 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Rere-201ENSMUST00000105680 6503 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Spp1-202ENSMUST00000086833 1411 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Hdac9-204ENSMUST00000209750 3204 ntAPPRIS P5 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 AC151904.1-201ENSMUST00000219945 1498 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Pcdh19-203ENSMUST00000167944 8407 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 BC051142-203ENSMUST00000114175 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm43314-201ENSMUST00000196744 2231 ntBASIC7.93□□□□□ -1.14
Trim47Q8C0E3 Gm21671-201ENSMUST00000162387 2421 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Dach2-203ENSMUST00000113379 2512 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Cxcr4-201ENSMUST00000052172 1805 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Olfr480-202ENSMUST00000217653 1876 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 AC154461.6-201ENSMUST00000224815 2630 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm10439-201ENSMUST00000101181 1977 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Elp2-201ENSMUST00000025120 2789 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm43507-202ENSMUST00000200281 2011 ntTSL 5 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm37077-201ENSMUST00000195723 3691 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm42679-201ENSMUST00000197086 2906 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm26384-201ENSMUST00000102183 110 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 n-R5s72-201ENSMUST00000104518 119 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm15108-201ENSMUST00000116160 803 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm11911-201ENSMUST00000117938 1023 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm14580-201ENSMUST00000119122 718 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm11708-201ENSMUST00000119530 832 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm9439-201ENSMUST00000119554 973 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm14678-201ENSMUST00000121396 482 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm23657-201ENSMUST00000122623 294 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm24228-201ENSMUST00000158829 129 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm16113-201ENSMUST00000159629 372 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm7316-201ENSMUST00000165395 445 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm5929-201ENSMUST00000166883 487 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Vmn2r-ps131-201ENSMUST00000176094 1046 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm21182-201ENSMUST00000178899 794 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm26528-201ENSMUST00000181965 283 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Mir6398-201ENSMUST00000184541 102 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm28542-201ENSMUST00000185545 696 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Khdrbs2-202ENSMUST00000185666 543 ntTSL 2 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm28185-201ENSMUST00000186815 694 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm29659-201ENSMUST00000187063 696 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm28682-201ENSMUST00000187430 696 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm28738-201ENSMUST00000187480 696 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm29319-201ENSMUST00000188060 696 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm29312-201ENSMUST00000188724 696 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm29637-201ENSMUST00000188877 696 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm18699-201ENSMUST00000190713 243 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm18291-201ENSMUST00000190791 301 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm29181-201ENSMUST00000191288 696 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm44300-201ENSMUST00000196792 121 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm44385-201ENSMUST00000198781 81 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Ighv1-68-201ENSMUST00000198789 294 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm43098-201ENSMUST00000199989 1297 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm18601-201ENSMUST00000220831 634 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm21731-202ENSMUST00000223770 886 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 AC108947.1-201ENSMUST00000224274 1000 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 AC162183.1-202ENSMUST00000225434 904 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 AC160999.1-201ENSMUST00000225675 810 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Rps29-201ENSMUST00000037023 390 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Aph1c-201ENSMUST00000057261 715 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Uqcrh-202ENSMUST00000078676 547 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm23734-201ENSMUST00000083753 109 ntBASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm4524-201ENSMUST00000161614 2152 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm28718-201ENSMUST00000188417 2168 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm28977-201ENSMUST00000188678 2168 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm28315-201ENSMUST00000189948 2168 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Wdr49-203ENSMUST00000204341 1344 ntTSL 5 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Trim47Q8C0E3 Gm3510-201ENSMUST00000180447 1455 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 103.6 ms