Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Gm16794-201ENSMUST00000180727 2100 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Pde4b-207ENSMUST00000106908 4304 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
Ccdc40Q8BI79 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm44416-201ENSMUST00000204055 2066 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gabrq-201ENSMUST00000033711 2000 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 1700006E09Rik-201ENSMUST00000010985 698 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm13156-201ENSMUST00000118348 321 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm15765-201ENSMUST00000118407 910 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Olfr1147-ps1-201ENSMUST00000122179 913 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm21999-201ENSMUST00000165985 387 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm5947-201ENSMUST00000179156 714 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm5645-201ENSMUST00000179597 714 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm38030-201ENSMUST00000192376 475 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm37135-201ENSMUST00000192652 534 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm38237-201ENSMUST00000193366 376 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 A330069K06Rik-201ENSMUST00000194077 917 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm5318-201ENSMUST00000205249 406 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Olfr396-ps1-202ENSMUST00000205791 633 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm45479-201ENSMUST00000211613 802 ntTSL 3 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 E330011O21Rik-208ENSMUST00000211650 1225 ntTSL 5 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 AC158521.1-202ENSMUST00000224352 645 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 CT030238.4-202ENSMUST00000226143 745 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Cypt1-201ENSMUST00000024026 672 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 AA467197-201ENSMUST00000047498 792 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm26442-201ENSMUST00000082588 153 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 S100pbp-202ENSMUST00000072431 4059 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm38142-201ENSMUST00000194093 3555 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Naip6-201ENSMUST00000042220 6705 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Gm6145-206ENSMUST00000211251 2850 ntTSL 5 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC6.3□□□□□ -1.4
Ccdc40Q8BI79 Abi3bp-201ENSMUST00000048471 4687 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gabpb1-201ENSMUST00000039978 1991 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm16092-201ENSMUST00000161449 2405 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm43981-201ENSMUST00000203285 1467 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 AC134329.1-201ENSMUST00000217956 1770 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Olfr178-202ENSMUST00000206523 2095 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Pate2-202ENSMUST00000118254 2215 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm22284-201ENSMUST00000104132 132 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm14065-201ENSMUST00000120848 585 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm14515-201ENSMUST00000121327 216 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Rps29-ps-201ENSMUST00000122083 172 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm24685-201ENSMUST00000157764 285 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm16269-201ENSMUST00000160532 409 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm6541-201ENSMUST00000165542 561 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 1700003H04Rik-203ENSMUST00000178485 761 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm26557-201ENSMUST00000180756 493 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Anxa3-202ENSMUST00000196126 453 ntTSL 2 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm43838-201ENSMUST00000196357 348 ntTSL 3 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm31887-201ENSMUST00000197661 501 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm5306-201ENSMUST00000203325 757 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm44892-201ENSMUST00000208595 488 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Olfr562-ps1-201ENSMUST00000210779 951 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm4032-201ENSMUST00000210886 487 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Gm45486-201ENSMUST00000211767 1109 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 AC163743.1-201ENSMUST00000224309 270 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 AC113031.1-201ENSMUST00000227400 432 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 AC137902.1-201ENSMUST00000228184 102 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Cox20-201ENSMUST00000027781 471 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC6.29□□□□□ -1.4
Ccdc40Q8BI79 Olfr564-201ENSMUST00000061096 951 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms