Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm37097-201ENSMUST00000193676 336 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm2429-201ENSMUST00000194635 586 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm6520-201ENSMUST00000200636 410 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm4265-201ENSMUST00000206701 674 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm44893-201ENSMUST00000207259 443 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Cfap70-202ENSMUST00000022349 3549 ntAPPRIS ALT2 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Bdnf-209ENSMUST00000111050 3965 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm38372-201ENSMUST00000194854 4028 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm36527-201ENSMUST00000195500 3029 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Pik3r4-201ENSMUST00000065778 4711 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm38263-201ENSMUST00000195879 3059 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Zkscan1-201ENSMUST00000019660 8261 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Irgm2-201ENSMUST00000058704 3470 ntAPPRIS P2 TSL 2 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm43285-201ENSMUST00000196563 3592 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm14367-201ENSMUST00000119214 1497 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 Btbd35f6-201ENSMUST00000179466 1497 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Btbd35f8-201ENSMUST00000180004 1497 ntAPPRIS P1 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Gm38009-201ENSMUST00000194884 3341 ntBASIC9.29□□□□□ -0.92
Col17a1Q07563 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Col17a1Q07563 Clasp1-206ENSMUST00000186349 7281 ntAPPRIS ALT2 TSL 5 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Olfr537-ps1-202ENSMUST00000210949 2821 ntAPPRIS P1 TSL 3 BASIC9.29□□□□□ -0.92
Col17a1Q07563 Tssc1-206ENSMUST00000221877 4091 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Nsun6-201ENSMUST00000028034 2897 ntAPPRIS P3 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm19719-201ENSMUST00000200934 4230 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Ppp2r3c-201ENSMUST00000021410 4216 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm12937-201ENSMUST00000118333 448 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm4989-201ENSMUST00000118711 749 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm7363-201ENSMUST00000119883 399 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm12466-201ENSMUST00000121199 620 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm29240-201ENSMUST00000187248 286 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm5339-201ENSMUST00000210551 1102 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm8679-201ENSMUST00000210651 1036 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 AC151984.1-201ENSMUST00000218261 2976 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm5169-201ENSMUST00000096469 768 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Rapgef6-210ENSMUST00000207429 5164 ntAPPRIS ALT2 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Sgms1-209ENSMUST00000142618 4036 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Col12a1-201ENSMUST00000071750 11511 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Phf3-205ENSMUST00000186733 7567 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Olfr510-202ENSMUST00000213979 2898 ntAPPRIS P1 TSL 5 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Ptprd-201ENSMUST00000050757 4698 ntTSL 5 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Mettl21e-201ENSMUST00000054801 3211 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Olfr122-202ENSMUST00000172582 1620 ntAPPRIS P1 TSL 2 BASIC9.28□□□□□ -0.92
Col17a1Q07563 AC107453.1-201ENSMUST00000227490 3268 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Tgtp1-201ENSMUST00000068063 2823 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm15638-203ENSMUST00000154775 2945 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm15340-201ENSMUST00000144984 704 ntTSL 1 (best) BASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm25057-201ENSMUST00000157366 88 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col17a1Q07563 AC156572.1-201ENSMUST00000221040 1161 ntTSL 5 BASIC9.28□□□□□ -0.92
Col17a1Q07563 CT954323.2-201ENSMUST00000222056 213 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Tas2r105-201ENSMUST00000053652 964 ntAPPRIS P1 BASIC9.28□□□□□ -0.92
Col17a1Q07563 Olfr480-201ENSMUST00000071658 1029 ntBASIC9.28□□□□□ -0.92
Col17a1Q07563 Gm38451-201ENSMUST00000208329 2646 ntBASIC9.27□□□□□ -0.92
Col17a1Q07563 Cd200r3-206ENSMUST00000114622 1339 ntTSL 1 (best) BASIC9.27□□□□□ -0.92
Col17a1Q07563 Apobec3-209ENSMUST00000176325 2765 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col17a1Q07563 Vmn1r39-208ENSMUST00000228919 2105 ntAPPRIS ALT2 BASIC9.27□□□□□ -0.92
Col17a1Q07563 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col17a1Q07563 Ep400-204ENSMUST00000112436 10685 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.92
Col17a1Q07563 Gm28667-201ENSMUST00000189873 2171 ntBASIC9.27□□□□□ -0.92
Col17a1Q07563 Zfp292-202ENSMUST00000098163 9941 ntAPPRIS ALT2 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col17a1Q07563 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC9.27□□□□□ -0.93
Col17a1Q07563 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col17a1Q07563 Dus4l-201ENSMUST00000020977 1773 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col17a1Q07563 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC9.27□□□□□ -0.93
Col17a1Q07563 Ankub1-201ENSMUST00000099091 2696 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col17a1Q07563 Myct1-201ENSMUST00000051809 2845 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col17a1Q07563 Adgrf1-201ENSMUST00000047399 3853 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col17a1Q07563 AC165260.6-205ENSMUST00000224190 9762 ntBASIC9.27□□□□□ -0.93
Col17a1Q07563 Lrrc40-201ENSMUST00000072080 4142 ntAPPRIS P1 TSL 1 (best) BASIC9.27□□□□□ -0.93
Col17a1Q07563 CT025619.1-201ENSMUST00000214294 2331 ntTSL 5 BASIC9.27□□□□□ -0.93
Col17a1Q07563 Gm12267-201ENSMUST00000121609 761 ntBASIC9.27□□□□□ -0.93
Col17a1Q07563 Gm12144-201ENSMUST00000136288 1292 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col17a1Q07563 Gm14022-201ENSMUST00000143857 691 ntTSL 1 (best) BASIC9.27□□□□□ -0.93
Col17a1Q07563 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC9.27□□□□□ -0.93
Col17a1Q07563 Gm25826-201ENSMUST00000157090 137 ntBASIC9.27□□□□□ -0.93
Col17a1Q07563 Gm24767-201ENSMUST00000158509 95 ntBASIC9.27□□□□□ -0.93
Col17a1Q07563 Gm8185-201ENSMUST00000160999 669 ntBASIC9.27□□□□□ -0.93
Col17a1Q07563 Gm29778-201ENSMUST00000201667 466 ntBASIC9.27□□□□□ -0.93
Col17a1Q07563 Fxyd1-210ENSMUST00000206012 501 ntAPPRIS P1 TSL 5 BASIC9.27□□□□□ -0.93
Col17a1Q07563 CT010575.2-201ENSMUST00000222876 496 ntTSL 2 BASIC9.27□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 74.5 ms