Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm15503-201ENSMUST00000141541 449 ntTSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 Gm17096-201ENSMUST00000172037 733 ntTSL 5 BASIC6.5□□□□□ -1.37
Tpm1P58771 Gm5624-202ENSMUST00000178184 492 ntAPPRIS ALT2 TSL 5 BASIC6.5□□□□□ -1.37
Tpm1P58771 Gm27804-201ENSMUST00000185135 119 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm3605-201ENSMUST00000185858 440 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm8581-201ENSMUST00000188636 890 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm18407-201ENSMUST00000192126 790 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm37341-201ENSMUST00000194680 371 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm3544-201ENSMUST00000196129 305 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm31211-201ENSMUST00000199170 253 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 4930480C01Rik-201ENSMUST00000200913 901 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Ss18l2-205ENSMUST00000215833 479 ntTSL 3 BASIC6.5□□□□□ -1.37
Tpm1P58771 AC151904.5-201ENSMUST00000218975 549 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 AC147782.1-201ENSMUST00000219169 475 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm31711-201ENSMUST00000220687 196 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Gm10095-201ENSMUST00000222765 483 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 1700014D04Rik-201ENSMUST00000055343 795 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Vmn1r50-201ENSMUST00000081706 933 ntAPPRIS P1 BASIC6.5□□□□□ -1.37
Tpm1P58771 Mir138-2-201ENSMUST00000083578 71 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 Vmn1r27-202ENSMUST00000226666 2969 ntAPPRIS ALT2 BASIC6.5□□□□□ -1.37
Tpm1P58771 Tgif1-210ENSMUST00000172229 1446 ntAPPRIS ALT1 TSL 3 BASIC6.5□□□□□ -1.37
Tpm1P58771 Olfr1285-202ENSMUST00000220153 1430 ntTSL 5 BASIC6.5□□□□□ -1.37
Tpm1P58771 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.5□□□□□ -1.37
Tpm1P58771 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 AC166358.5-201ENSMUST00000220706 1302 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 CT009480.3-201ENSMUST00000224051 3032 ntBASIC6.5□□□□□ -1.37
Tpm1P58771 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Trav6-6-201ENSMUST00000103584 344 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Tpm1P58771 Trav6n-5-201ENSMUST00000103611 338 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Tpm1P58771 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Tpm1P58771 Insl5-202ENSMUST00000106869 438 ntAPPRIS ALT2 TSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 Dynlt1-ps1-201ENSMUST00000117045 342 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm12099-201ENSMUST00000118660 750 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm13444-201ENSMUST00000119445 522 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm14267-201ENSMUST00000119751 496 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm12322-201ENSMUST00000121605 389 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 BB218582-201ENSMUST00000123623 1024 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 Gm16152-201ENSMUST00000131663 872 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 Rpl35a-ps5-201ENSMUST00000137013 333 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm23279-201ENSMUST00000157912 97 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm22160-201ENSMUST00000158405 328 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm8032-201ENSMUST00000171009 574 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm5871-201ENSMUST00000176461 718 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm9602-202ENSMUST00000177973 615 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Trav6d-7-201ENSMUST00000178650 358 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Tpm1P58771 Trav6n-7-201ENSMUST00000179607 358 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Tpm1P58771 Gm21654-201ENSMUST00000188086 691 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm5734-201ENSMUST00000189787 913 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm2367-201ENSMUST00000192374 472 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm38185-201ENSMUST00000193195 694 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Trav6d-6-201ENSMUST00000197754 344 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Tpm1P58771 Gm8930-201ENSMUST00000201693 768 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Tpm1P58771 Gm45082-201ENSMUST00000206082 601 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm6702-201ENSMUST00000208496 471 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm19324-201ENSMUST00000213229 1169 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 AC079644.2-201ENSMUST00000220581 322 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 2310030G06Rik-201ENSMUST00000034564 1257 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 Ninj2-201ENSMUST00000035244 823 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
Tpm1P58771 Magea4-201ENSMUST00000048675 948 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Tpm1P58771 Morn2-201ENSMUST00000061703 644 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Ssxb5-201ENSMUST00000089370 602 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Gm17165-201ENSMUST00000096155 493 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Vmn1r168-201ENSMUST00000098704 930 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
Tpm1P58771 Slc17a4-201ENSMUST00000021769 1604 ntAPPRIS P2 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Olfr1252-202ENSMUST00000213196 3331 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Gm42827-201ENSMUST00000197058 1515 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
Tpm1P58771 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC6.49□□□□□ -1.37
Tpm1P58771 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Gm8853-201ENSMUST00000198366 1344 ntBASIC6.49□□□□□ -1.37
Tpm1P58771 Cse1l-210ENSMUST00000168599 2748 ntTSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Prom1-203ENSMUST00000087441 3664 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Hsf3-204ENSMUST00000164693 2076 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Mdn1-211ENSMUST00000178134 17959 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 Zc2hc1a-201ENSMUST00000051064 3292 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Olfr341-202ENSMUST00000213300 6634 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 Gm26984-201ENSMUST00000182345 3510 ntBASIC6.48□□□□□ -1.37
Tpm1P58771 Olfr1392-203ENSMUST00000214170 3507 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 Olfr1392-205ENSMUST00000214598 3506 ntAPPRIS P1 TSL 5 BASIC6.48□□□□□ -1.37
Tpm1P58771 Smarca2-203ENSMUST00000112637 1962 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
Tpm1P58771 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
Retrieved 100 of 76,532 protein–RNA pairs in 108.7 ms