Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm10855-201ENSMUST00000100426 2541 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Obox3-201ENSMUST00000086122 1890 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm43857-201ENSMUST00000200343 3079 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Myo6-203ENSMUST00000113266 7632 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Cdh9-201ENSMUST00000026432 2892 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm18194-202ENSMUST00000210952 3442 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Cacna1c-209ENSMUST00000187386 6906 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 AC159195.2-201ENSMUST00000223670 3757 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm12488-201ENSMUST00000122449 499 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm23537-201ENSMUST00000157536 330 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm18358-201ENSMUST00000173179 1277 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 4932441J04Rik-201ENSMUST00000180708 729 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm26915-201ENSMUST00000183080 748 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 1700121L03Rik-201ENSMUST00000187796 704 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm37932-201ENSMUST00000192258 1167 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm20203-201ENSMUST00000192352 332 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm43467-201ENSMUST00000197441 437 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm8667-201ENSMUST00000211112 449 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm10709-201ENSMUST00000213318 480 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 AL929417.1-201ENSMUST00000214901 124 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Gm7042-201ENSMUST00000223027 384 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 AC153646.1-201ENSMUST00000223229 1279 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC8.1□□□□□ -1.11
Col18a1P39061 AC154594.1-201ENSMUST00000225171 1273 ntBASIC8.1□□□□□ -1.11
Col18a1P39061 Olfr114-201ENSMUST00000076914 1000 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Col18a1P39061 Gm37169-201ENSMUST00000195599 4161 ntBASIC8.09□□□□□ -1.11
Col18a1P39061 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Klhl23-201ENSMUST00000053087 4617 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Mroh2a-202ENSMUST00000113130 7491 ntAPPRIS P2 TSL 5 BASIC8.09□□□□□ -1.11
Col18a1P39061 Gm37738-201ENSMUST00000192396 4716 ntBASIC8.09□□□□□ -1.11
Col18a1P39061 Il18r1-205ENSMUST00000193793 1652 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Vmn1r87-204ENSMUST00000228800 1993 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col18a1P39061 Gria1-204ENSMUST00000151045 5361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Cd209b-201ENSMUST00000084086 2039 ntAPPRIS P4 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Col18a1P39061 Ttc28-201ENSMUST00000040111 10780 ntAPPRIS ALT2 TSL 5 BASIC8.09□□□□□ -1.11
Col18a1P39061 D030068K23Rik-202ENSMUST00000180524 3677 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 B130006D01Rik-201ENSMUST00000100534 3124 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col18a1P39061 Gm13259-201ENSMUST00000120792 456 ntBASIC8.09□□□□□ -1.11
Col18a1P39061 Junos-206ENSMUST00000133772 635 ntTSL 2 BASIC8.09□□□□□ -1.11
Col18a1P39061 Gm13389-201ENSMUST00000142774 639 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Gm9320-201ENSMUST00000184151 473 ntBASIC8.09□□□□□ -1.11
Col18a1P39061 Gm5554-201ENSMUST00000199726 1206 ntBASIC8.09□□□□□ -1.11
Col18a1P39061 Gm8523-201ENSMUST00000211386 552 ntBASIC8.09□□□□□ -1.11
Col18a1P39061 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC8.09□□□□□ -1.11
Col18a1P39061 Gm31432-201ENSMUST00000214727 538 ntTSL 5 BASIC8.09□□□□□ -1.11
Col18a1P39061 Gm6841-201ENSMUST00000220602 598 ntBASIC8.09□□□□□ -1.11
Col18a1P39061 Gm8412-201ENSMUST00000077493 440 ntBASIC8.09□□□□□ -1.11
Col18a1P39061 Olfr1138-201ENSMUST00000099848 936 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col18a1P39061 Phf3-201ENSMUST00000088310 7561 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Myt1-201ENSMUST00000081125 5327 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Prdm16-204ENSMUST00000105636 8426 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col18a1P39061 Gm37429-201ENSMUST00000193807 1799 ntBASIC8.09□□□□□ -1.12
Col18a1P39061 Olfr77-201ENSMUST00000057596 9649 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Col18a1P39061 Vmn1r44-212ENSMUST00000228183 1838 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Wars2-201ENSMUST00000004343 4410 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Kmt2a-202ENSMUST00000114689 16470 ntAPPRIS ALT2 TSL 5 BASIC8.08□□□□□ -1.12
Col18a1P39061 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC8.08□□□□□ -1.12
Col18a1P39061 Ap5m1-208ENSMUST00000228238 3514 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm3563-201ENSMUST00000172963 1628 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Agbl1-203ENSMUST00000156166 3369 ntAPPRIS P2 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Gpr158-201ENSMUST00000055946 7171 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm25422-201ENSMUST00000104219 129 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm13770-201ENSMUST00000117149 305 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Gm14388-201ENSMUST00000118119 477 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Gm24685-201ENSMUST00000157764 285 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Gm26318-201ENSMUST00000176507 96 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm28385-201ENSMUST00000185671 292 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 1700029M03Rik-202ENSMUST00000187517 357 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Col18a1P39061 4930478M09Rik-201ENSMUST00000201366 1113 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Gm43973-201ENSMUST00000203562 210 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 Gm35615-201ENSMUST00000221255 719 ntTSL 3 BASIC8.08□□□□□ -1.12
Col18a1P39061 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col18a1P39061 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col18a1P39061 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col18a1P39061 Vmn1r34-207ENSMUST00000228647 2979 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col18a1P39061 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col18a1P39061 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col18a1P39061 Olfr149-201ENSMUST00000082027 1030 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Col18a1P39061 Gm22807-201ENSMUST00000082737 129 ntBASIC8.08□□□□□ -1.12
Col18a1P39061 2410089E03Rik-201ENSMUST00000110617 10469 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 75.2 ms