Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Plce1-203ENSMUST00000182267 7234 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 5031434C07Rik-202ENSMUST00000188014 3244 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm45887-201ENSMUST00000212672 2998 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Nxt2-203ENSMUST00000112914 2484 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm29123-201ENSMUST00000185808 3657 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 AC124414.1-201ENSMUST00000218033 2946 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Mtm1-205ENSMUST00000114617 3338 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Mtm1-202ENSMUST00000033700 3316 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Lipk-201ENSMUST00000054260 2125 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Mlh3-203ENSMUST00000220854 4699 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.58□□□□□ -1.36
Nkx6-1Q99MA9 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Ndnf-201ENSMUST00000054351 10101 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Apbb2-210ENSMUST00000160870 6526 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm37283-201ENSMUST00000193111 1571 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Olfr651-203ENSMUST00000216904 1598 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Slco6b1-202ENSMUST00000178359 1778 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Olfr901-202ENSMUST00000216502 2639 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm37010-201ENSMUST00000194539 1704 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Olfr224-203ENSMUST00000216758 1742 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Brwd3-205ENSMUST00000150434 11619 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 CT010577.1-202ENSMUST00000226187 1903 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Sorbs2-220ENSMUST00000139869 4275 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm23311-201ENSMUST00000104152 134 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Snord88a-201ENSMUST00000116723 90 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm13878-201ENSMUST00000117986 577 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm13640-201ENSMUST00000118445 264 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm12026-201ENSMUST00000120961 1024 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm15632-201ENSMUST00000135936 246 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm25898-201ENSMUST00000158303 106 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm17079-201ENSMUST00000167231 666 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm18006-201ENSMUST00000177411 662 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm7426-201ENSMUST00000179046 404 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm21241-201ENSMUST00000179551 934 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm28489-201ENSMUST00000186655 316 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm28358-201ENSMUST00000187860 636 ntTSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm18181-201ENSMUST00000190670 736 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm28490-202ENSMUST00000190946 930 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm38022-201ENSMUST00000191762 403 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm38122-201ENSMUST00000192679 885 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm42502-201ENSMUST00000198550 1089 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm3321-201ENSMUST00000200603 1129 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Olfr494-201ENSMUST00000209743 1002 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 AC112274.2-201ENSMUST00000218436 170 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm18940-201ENSMUST00000222518 871 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm7252-201ENSMUST00000223284 456 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gnrh1-202ENSMUST00000223929 428 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Olfr893-201ENSMUST00000093867 942 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Duxbl3-201ENSMUST00000100804 2336 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Usp37-201ENSMUST00000044260 7111 ntTSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 4930563E22Rik-201ENSMUST00000066087 3313 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Scyl3-203ENSMUST00000161908 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Mei1-204ENSMUST00000189540 3718 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Scn1a-202ENSMUST00000094951 5946 ntTSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Otogl-201ENSMUST00000165341 8763 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1138-202ENSMUST00000214573 1611 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm26849-201ENSMUST00000180561 1842 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Klrc2-205ENSMUST00000145984 2811 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Zfp462-203ENSMUST00000098070 10465 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Gm43059-201ENSMUST00000202437 1388 ntBASIC6.57□□□□□ -1.36
Nkx6-1Q99MA9 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Stra6l-203ENSMUST00000107783 3669 ntAPPRIS P3 TSL 5 BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 F930017D23Rik-202ENSMUST00000213342 2141 ntTSL 5 BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Gm45843-201ENSMUST00000212317 4597 ntTSL 5 BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Olfr50-203ENSMUST00000217041 1507 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 AC154630.1-201ENSMUST00000215334 2440 ntBASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 1700029M20Rik-203ENSMUST00000153347 2963 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Musk-202ENSMUST00000084578 3347 ntAPPRIS P2 TSL 5 BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Gm37147-201ENSMUST00000193756 1498 ntTSL 5 BASIC6.56□□□□□ -1.36
Nkx6-1Q99MA9 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 69.2 ms