Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm43557-201ENSMUST00000197100 2370 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Mob1b-202ENSMUST00000113229 8967 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Epb41l2-219ENSMUST00000220290 4345 ntTSL 5 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Alcam-207ENSMUST00000170035 1917 ntTSL 5 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Atl3-201ENSMUST00000025668 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Dlg2-201ENSMUST00000074273 5278 ntAPPRIS ALT2 TSL 5 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Olfr12-202ENSMUST00000213247 4158 ntAPPRIS P1 TSL 5 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Mbnl1-218ENSMUST00000194069 5460 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Prkaa1-202ENSMUST00000228218 4618 ntBASIC9.35□□□□□ -0.91
Col17a1Q07563 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC9.35□□□□□ -0.91
Col17a1Q07563 Zkscan8-201ENSMUST00000045228 8805 ntAPPRIS P2 TSL 1 (best) BASIC9.35□□□□□ -0.91
Col17a1Q07563 Gm8750-201ENSMUST00000173278 1537 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm13870-201ENSMUST00000117214 1023 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm14842-201ENSMUST00000119577 269 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC9.34□□□□□ -0.91
Col17a1Q07563 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm37421-201ENSMUST00000193088 132 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm42916-201ENSMUST00000197142 1042 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm33952-201ENSMUST00000197795 408 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm43348-201ENSMUST00000197867 530 ntTSL 3 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm43561-201ENSMUST00000199866 448 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm18781-201ENSMUST00000211252 924 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 AC127279.1-201ENSMUST00000220140 637 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC9.34□□□□□ -0.91
Col17a1Q07563 AC091783.2-201ENSMUST00000224626 740 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 Cypt4-201ENSMUST00000053956 629 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Olfr1272-202ENSMUST00000117141 2442 ntAPPRIS P1 TSL 5 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 AC159195.2-201ENSMUST00000223670 3757 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Ehbp1-201ENSMUST00000045167 4821 ntAPPRIS P3 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm44898-201ENSMUST00000205934 2223 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 AC116950.1-201ENSMUST00000226322 3250 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Fam227b-204ENSMUST00000178118 1599 ntAPPRIS P2 TSL 5 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm30122-202ENSMUST00000218662 1556 ntTSL 5 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm13040-201ENSMUST00000094521 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm28583-201ENSMUST00000188903 2141 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Adam22-206ENSMUST00000115386 9056 ntAPPRIS ALT2 TSL 5 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Pira2-202ENSMUST00000119469 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm6820-201ENSMUST00000188803 2173 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Sytl2-206ENSMUST00000190731 3838 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 Zfp14-203ENSMUST00000207873 3411 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 Myo6-202ENSMUST00000076140 7663 ntTSL 5 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm14667-201ENSMUST00000119448 1350 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 9530036O11Rik-202ENSMUST00000181202 2926 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm12308-201ENSMUST00000120440 389 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm12110-201ENSMUST00000121601 579 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm18595-201ENSMUST00000175736 1068 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Mir3473f-201ENSMUST00000183743 136 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Vis1-201ENSMUST00000183957 201 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC9.34□□□□□ -0.91
Col17a1Q07563 2010110G14Rik-201ENSMUST00000196438 527 ntTSL 5 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm45008-201ENSMUST00000206420 493 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Gm8290-201ENSMUST00000218202 477 ntBASIC9.34□□□□□ -0.91
Col17a1Q07563 Prss58-201ENSMUST00000063523 979 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Col17a1Q07563 Olfr1305-201ENSMUST00000099608 939 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Col17a1Q07563 Kng1-201ENSMUST00000023589 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.92
Col17a1Q07563 Gm14802-201ENSMUST00000121944 1885 ntBASIC9.33□□□□□ -0.92
Col17a1Q07563 Pfkfb2-204ENSMUST00000171479 3342 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col17a1Q07563 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Col17a1Q07563 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col17a1Q07563 Arhgap6-203ENSMUST00000112127 3973 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col17a1Q07563 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col17a1Q07563 Nsd2-204ENSMUST00000114397 5738 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col17a1Q07563 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col17a1Q07563 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Col17a1Q07563 Grik1-209ENSMUST00000227986 2942 ntBASIC9.33□□□□□ -0.92
Col17a1Q07563 Siglec1-201ENSMUST00000028794 6387 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Col17a1Q07563 Gm37132-201ENSMUST00000195553 2238 ntBASIC9.33□□□□□ -0.92
Col17a1Q07563 Gm12293-201ENSMUST00000121898 590 ntBASIC9.33□□□□□ -0.92
Col17a1Q07563 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC9.33□□□□□ -0.92
Col17a1Q07563 Gm5-202ENSMUST00000202386 420 ntTSL 3 BASIC9.33□□□□□ -0.92
Col17a1Q07563 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC9.33□□□□□ -0.92
Col17a1Q07563 Gm44833-201ENSMUST00000208368 331 ntBASIC9.33□□□□□ -0.92
Col17a1Q07563 Gm8291-201ENSMUST00000209635 1261 ntBASIC9.33□□□□□ -0.92
Col17a1Q07563 AC132446.1-201ENSMUST00000222655 226 ntBASIC9.33□□□□□ -0.92
Col17a1Q07563 Smim15-203ENSMUST00000224361 830 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Col17a1Q07563 AC156031.1-201ENSMUST00000217288 2555 ntBASIC9.33□□□□□ -0.92
Col17a1Q07563 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC9.33□□□□□ -0.92
Col17a1Q07563 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC9.33□□□□□ -0.92
Col17a1Q07563 Cdc42bpa-218ENSMUST00000212756 5247 ntTSL 5 BASIC9.33□□□□□ -0.92
Col17a1Q07563 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm16758-201ENSMUST00000149552 3848 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col17a1Q07563 A330076C08Rik-201ENSMUST00000220765 5020 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm31562-201ENSMUST00000213973 2747 ntTSL 5 BASIC9.32□□□□□ -0.92
Col17a1Q07563 Adgrl2-205ENSMUST00000196526 5615 ntTSL 5 BASIC9.32□□□□□ -0.92
Col17a1Q07563 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col17a1Q07563 Prame-202ENSMUST00000113159 2268 ntAPPRIS P1 TSL 5 BASIC9.32□□□□□ -0.92
Col17a1Q07563 Tcf4-207ENSMUST00000114985 8577 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Col17a1Q07563 CT030185.1-201ENSMUST00000222940 2289 ntBASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms