Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 AC117769.3-201ENSMUST00000225814 1664 ntBASIC5.79□□□□□ -1.48
Lsm1Q8VC85 CT025604.1-201ENSMUST00000221111 3436 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm30211-201ENSMUST00000197227 3078 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Vmn2r98-201ENSMUST00000170424 2574 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 AC166358.5-201ENSMUST00000220706 1302 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm12800-201ENSMUST00000075999 1455 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm36099-201ENSMUST00000221946 1798 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm4841-201ENSMUST00000090260 2838 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm37897-201ENSMUST00000192613 3561 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 2610524H06Rik-201ENSMUST00000100850 947 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm11011-201ENSMUST00000109160 258 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm12923-201ENSMUST00000127060 667 ntTSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm11734-201ENSMUST00000132261 728 ntTSL 3 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Mir1960-201ENSMUST00000157488 78 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Plac1-203ENSMUST00000174390 907 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm26557-201ENSMUST00000180756 493 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 9330159M07Rik-203ENSMUST00000181448 602 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm9556-201ENSMUST00000182938 940 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm37135-201ENSMUST00000192652 534 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm43743-202ENSMUST00000198353 491 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm44163-201ENSMUST00000205140 475 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm44717-201ENSMUST00000208133 578 ntTSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm18559-201ENSMUST00000208249 604 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm8863-201ENSMUST00000216630 926 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm40685-201ENSMUST00000217861 580 ntTSL 3 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 AC160138.1-201ENSMUST00000217965 588 ntTSL 3 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 AC079680.1-201ENSMUST00000218730 649 ntTSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm8412-201ENSMUST00000077493 440 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm6419-201ENSMUST00000097166 429 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Zpld1-201ENSMUST00000036412 2589 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Ckap5-203ENSMUST00000111337 6384 ntTSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm13101-201ENSMUST00000105763 1678 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm18880-201ENSMUST00000223333 1541 ntBASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Hmgn3-203ENSMUST00000185315 1391 ntAPPRIS ALT2 TSL 2 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm4922-202ENSMUST00000216654 2357 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm13057-201ENSMUST00000105776 2093 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Lsm1Q8VC85 Gm7792-201ENSMUST00000201555 2473 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.48
Lsm1Q8VC85 Kmt2d-202ENSMUST00000178486 19805 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Stx17-202ENSMUST00000107720 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm15583-201ENSMUST00000116191 3510 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Ccdc110-201ENSMUST00000095326 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 AL670757.1-201ENSMUST00000223668 1959 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Olfr726-207ENSMUST00000217319 1419 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm9311-201ENSMUST00000118042 1269 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm5843-201ENSMUST00000121631 476 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm11200-201ENSMUST00000121698 448 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm15840-201ENSMUST00000122099 943 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm13807-201ENSMUST00000137073 1295 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Snora47-201ENSMUST00000157483 138 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Mir1945-201ENSMUST00000157919 78 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm17198-201ENSMUST00000171792 1154 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm20506-201ENSMUST00000172952 589 ntTSL 3 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm22701-201ENSMUST00000175371 291 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Snhg14-205ENSMUST00000186345 456 ntTSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm28616-201ENSMUST00000187344 441 ntTSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Slamf7-205ENSMUST00000194791 909 ntAPPRIS ALT2 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 AC159886.1-201ENSMUST00000217099 1091 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Mrpl42-202ENSMUST00000217777 455 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 AC164302.1-201ENSMUST00000227036 433 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 AC105324.1-201ENSMUST00000227844 386 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 AC154757.2-201ENSMUST00000228885 743 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 4930522N08Rik-201ENSMUST00000031274 916 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 4930519F16Rik-201ENSMUST00000033688 1113 ntTSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Olfr1404-201ENSMUST00000056592 1034 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Tas2r143-201ENSMUST00000057398 882 ntAPPRIS P1 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Mup13-202ENSMUST00000098042 984 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm14661-201ENSMUST00000152669 2051 ntTSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Olfr351-203ENSMUST00000215137 2856 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Ppig-202ENSMUST00000090858 6127 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Pcdh9-208ENSMUST00000195826 6521 ntAPPRIS P3 TSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Map7d3-201ENSMUST00000114766 2891 ntAPPRIS P1 TSL 1 (best) BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.77□□□□□ -1.49
Lsm1Q8VC85 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.77□□□□□ -1.49
Lsm1Q8VC85 1700019D03Rik-203ENSMUST00000114493 3619 ntAPPRIS P1 TSL 1 (best) BASIC5.76□□□□□ -1.49
Retrieved 100 of 76,532 protein–RNA pairs in 63 ms