Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
ClcnkaQ9WUB7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Gm5828-201ENSMUST00000071842 1860 ntBASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Gm22325-201ENSMUST00000158904 308 ntBASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Gm10602-201ENSMUST00000098239 609 ntBASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
ClcnkaQ9WUB7 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
ClcnkaQ9WUB7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
ClcnkaQ9WUB7 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
ClcnkaQ9WUB7 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
ClcnkaQ9WUB7 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.52■□□□□ 0.23
ClcnkaQ9WUB7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
ClcnkaQ9WUB7 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
ClcnkaQ9WUB7 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 60.5 ms