Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Tnfrsf13bQ9ET35 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC14.19□□□□□ -0.14
Tnfrsf13bQ9ET35 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Tnfrsf13bQ9ET35 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Gm43808-201ENSMUST00000202534 2065 ntBASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.17□□□□□ -0.14
Tnfrsf13bQ9ET35 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Gm6139-201ENSMUST00000079261 882 ntBASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Tnfrsf13bQ9ET35 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Gm43034-201ENSMUST00000198678 1364 ntBASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC14.15□□□□□ -0.14
Tnfrsf13bQ9ET35 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Tnfrsf13bQ9ET35 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Gm13146-201ENSMUST00000118508 780 ntBASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Tnfrsf13bQ9ET35 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf13bQ9ET35 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Tnfrsf13bQ9ET35 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms