Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Gm37805-201ENSMUST00000192612 1094 ntBASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Gm7417-201ENSMUST00000192950 473 ntBASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Gm5812-201ENSMUST00000061073 957 ntBASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Upk3bl1Q9D701 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Mtfr1l-202ENSMUST00000116279 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Upk3bl1Q9D701 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Gm15546-201ENSMUST00000122095 826 ntBASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Upk3bl1Q9D701 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Upk3bl1Q9D701 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Upk3bl1Q9D701 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk3bl1Q9D701 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Upk3bl1Q9D701 Hivep3-201ENSMUST00000084306 2973 ntBASIC16.33■□□□□ 0.21
Upk3bl1Q9D701 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 Haglr-201ENSMUST00000100000 2085 ntBASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
Upk3bl1Q9D701 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Gm37374-201ENSMUST00000194954 1829 ntBASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 AC107452.1-201ENSMUST00000227963 481 ntBASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Upk3bl1Q9D701 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 10.2 ms