Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 AC153889.1-201ENSMUST00000219257 330 ntBASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Lysmd1Q9D0E3 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Gm15467-201ENSMUST00000120582 445 ntBASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Gm3272-201ENSMUST00000181181 1229 ntBASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Gm10566-201ENSMUST00000086739 996 ntBASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Lysmd1Q9D0E3 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Gm15794-201ENSMUST00000120182 631 ntBASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Gm26766-202ENSMUST00000227544 2347 ntBASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC19.35■□□□□ 0.69
Lysmd1Q9D0E3 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC19.34■□□□□ 0.69
Lysmd1Q9D0E3 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd1Q9D0E3 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd1Q9D0E3 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Lysmd1Q9D0E3 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
Lysmd1Q9D0E3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.33■□□□□ 0.68
Lysmd1Q9D0E3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Lysmd1Q9D0E3 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Lysmd1Q9D0E3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC19.33■□□□□ 0.68
Lysmd1Q9D0E3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd1Q9D0E3 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd1Q9D0E3 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd1Q9D0E3 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Lysmd1Q9D0E3 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Gm24513-201ENSMUST00000174964 138 ntBASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Gm27397-201ENSMUST00000184997 107 ntBASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lysmd1Q9D0E3 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lysmd1Q9D0E3 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lysmd1Q9D0E3 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms