Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Smc3Q9CW03 Zcchc6-207ENSMUST00000225576 2499 ntBASIC21.17■□□□□ 0.98
Smc3Q9CW03 Fcho2-208ENSMUST00000224992 2964 ntBASIC21.16■□□□□ 0.98
Smc3Q9CW03 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc3Q9CW03 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc3Q9CW03 Gm38345-201ENSMUST00000192635 1748 ntBASIC21.16■□□□□ 0.98
Smc3Q9CW03 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC21.16■□□□□ 0.98
Smc3Q9CW03 Gm22325-201ENSMUST00000158904 308 ntBASIC21.16■□□□□ 0.98
Smc3Q9CW03 Ap3s1-204ENSMUST00000225520 957 ntBASIC21.16■□□□□ 0.98
Smc3Q9CW03 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc3Q9CW03 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smc3Q9CW03 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Smc3Q9CW03 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Smc3Q9CW03 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc3Q9CW03 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Smc3Q9CW03 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc3Q9CW03 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc3Q9CW03 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Smc3Q9CW03 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Smc3Q9CW03 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC21.15■□□□□ 0.98
Smc3Q9CW03 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc3Q9CW03 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Smc3Q9CW03 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smc3Q9CW03 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Smc3Q9CW03 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Smc3Q9CW03 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Smc3Q9CW03 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc3Q9CW03 Krt80-201ENSMUST00000077196 1774 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc3Q9CW03 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Smc3Q9CW03 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Smc3Q9CW03 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Smc3Q9CW03 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Smc3Q9CW03 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc3Q9CW03 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Smc3Q9CW03 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC21.12■□□□□ 0.97
Smc3Q9CW03 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC21.12■□□□□ 0.97
Smc3Q9CW03 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Gm37374-201ENSMUST00000194954 1829 ntBASIC21.12■□□□□ 0.97
Smc3Q9CW03 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Smc3Q9CW03 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc3Q9CW03 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC21.11■□□□□ 0.97
Smc3Q9CW03 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc3Q9CW03 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc3Q9CW03 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc3Q9CW03 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Smc3Q9CW03 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc3Q9CW03 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Smc3Q9CW03 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Gm7514-201ENSMUST00000209475 934 ntBASIC21.1■□□□□ 0.97
Smc3Q9CW03 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Smc3Q9CW03 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Smc3Q9CW03 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Otud7a-201ENSMUST00000058476 3483 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Smc3Q9CW03 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Smc3Q9CW03 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Smc3Q9CW03 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc3Q9CW03 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Smc3Q9CW03 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Smc3Q9CW03 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC21.08■□□□□ 0.97
Smc3Q9CW03 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 27.2 ms