Protein–RNA interactions for Protein: Q99P47

Cntnap4, Contactin-associated protein-like 4, mousemouse

Predictions only

Length 1,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap4Q99P47 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap4Q99P47 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap4Q99P47 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap4Q99P47 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap4Q99P47 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cntnap4Q99P47 Gm45560-201ENSMUST00000211492 1472 ntBASIC19.31■□□□□ 0.68
Cntnap4Q99P47 Gm15375-201ENSMUST00000119510 849 ntBASIC19.31■□□□□ 0.68
Cntnap4Q99P47 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC19.31■□□□□ 0.68
Cntnap4Q99P47 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap4Q99P47 Gm7367-201ENSMUST00000057611 492 ntBASIC19.31■□□□□ 0.68
Cntnap4Q99P47 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap4Q99P47 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap4Q99P47 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap4Q99P47 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap4Q99P47 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cntnap4Q99P47 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 AC175538.1-201ENSMUST00000225343 1269 ntBASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cntnap4Q99P47 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Gm45906-201ENSMUST00000208911 1430 ntBASIC19.29■□□□□ 0.68
Cntnap4Q99P47 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Gm9484-201ENSMUST00000195892 1159 ntBASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Gm18025-201ENSMUST00000221733 862 ntBASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cntnap4Q99P47 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Cntnap4Q99P47 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cntnap4Q99P47 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.27■□□□□ 0.68
Cntnap4Q99P47 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Cntnap4Q99P47 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cntnap4Q99P47 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.27■□□□□ 0.68
Cntnap4Q99P47 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
Cntnap4Q99P47 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cntnap4Q99P47 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cntnap4Q99P47 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cntnap4Q99P47 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cntnap4Q99P47 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cntnap4Q99P47 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Gm37055-201ENSMUST00000191866 133 ntBASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Cntnap4Q99P47 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Cntnap4Q99P47 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms